{"id":69539,"name":"pharmd","description":"MD pharmacophores and virtual screening","url":"https://github.com/ci-lab-cz/pharmd","last_synced_at":"2025-09-08T14:53:43.801Z","repository":{"id":44796033,"uuid":"219155182","full_name":"ci-lab-cz/pharmd","owner":"ci-lab-cz","description":"MD pharmacophores and virtual screening","archived":false,"fork":false,"pushed_at":"2023-12-15T09:17:48.000Z","size":47,"stargazers_count":33,"open_issues_count":4,"forks_count":17,"subscribers_count":4,"default_branch":"master","last_synced_at":"2025-08-24T18:46:40.151Z","etag":null,"topics":["chemoinformatics","pharmacophore-models"],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ci-lab-cz.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2019-11-02T13:06:59.000Z","updated_at":"2024-12-09T03:53:15.000Z","dependencies_parsed_at":"2023-01-23T05:46:06.952Z","dependency_job_id":null,"html_url":"https://github.com/ci-lab-cz/pharmd","commit_stats":null,"previous_names":[],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/ci-lab-cz/pharmd","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ci-lab-cz","download_url":"https://codeload.github.com/ci-lab-cz/pharmd/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/sbom","scorecard":{"id":282387,"data":{"date":"2025-08-11","repo":{"name":"github.com/ci-lab-cz/pharmd","commit":"de31ca18036e043f5e15f359e14cdfd9b0a9f8c6"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":3.2,"checks":[{"name":"Dangerous-Workflow","score":-1,"reason":"no workflows found","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Pinned-Dependencies","score":-1,"reason":"no dependencies found","details":null,"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"Maintained","score":0,"reason":"0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Code-Review","score":1,"reason":"Found 2/11 approved changesets -- score normalized to 1","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Token-Permissions","score":-1,"reason":"No tokens found","details":null,"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Vulnerabilities","score":10,"reason":"0 existing vulnerabilities detected","details":null,"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE.txt:0","Info: FSF or OSI recognized license: BSD 3-Clause \"New\" or \"Revised\" License: LICENSE.txt:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Signed-Releases","score":-1,"reason":"no releases found","details":null,"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 22 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}}]},"last_synced_at":"2025-08-17T16:14:40.310Z","repository_id":44796033,"created_at":"2025-08-17T16:14:40.310Z","updated_at":"2025-08-17T16:14:40.310Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274202346,"owners_count":25240365,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"ci-lab-cz","name":"Chemical intelligence lab","uuid":"56028890","kind":"organization","description":"Chemoinformatics and drug design group at IMTM UPOL","email":null,"website":"https://imtm.cz/research-groups/polishchuk-group","location":"Czech Republic","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/56028890?v=4","repositories_count":4,"last_synced_at":"2023-03-11T12:10:42.031Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/ci-lab-cz","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-15T02:50:08.918Z","updated_at":"2023-03-11T12:10:42.048Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ci-lab-cz","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ci-lab-cz/repositories"},"packages":[{"id":2850567,"name":"pharmd","ecosystem":"pypi","description":"PharMD: MD pharmacophores and virtual screening","homepage":"https://github.com/ci-lab-cz/pharmd.git","licenses":"BSD License","normalized_licenses":["BSD-3-Clause"],"repository_url":"https://github.com/ci-lab-cz/pharmd","keywords_array":[],"namespace":null,"versions_count":2,"first_release_published_at":"2019-11-02T13:48:20.000Z","latest_release_published_at":"2019-12-16T08:42:30.000Z","latest_release_number":"0.1.1","last_synced_at":"2025-08-24T14:34:16.255Z","created_at":"2022-04-10T12:02:18.417Z","updated_at":"2025-08-24T15:13:52.871Z","registry_url":"https://pypi.org/project/pharmd/","install_command":"pip install pharmd --index-url https://pypi.org/simple","documentation_url":"https://pharmd.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":["License :: OSI Approved :: BSD License","Operating System :: OS Independent","Programming Language :: Python :: 3","Topic :: Scientific/Engineering :: Bio-Informatics","Topic :: Scientific/Engineering :: Chemistry"],"normalized_name":"pharmd","project_status":null},"repo_metadata":{"id":44796033,"uuid":"219155182","full_name":"ci-lab-cz/pharmd","owner":"ci-lab-cz","description":"MD pharmacophores and virtual screening","archived":false,"fork":false,"pushed_at":"2023-12-15T09:17:48.000Z","size":47,"stargazers_count":33,"open_issues_count":4,"forks_count":17,"subscribers_count":4,"default_branch":"master","last_synced_at":"2025-06-11T12:11:39.108Z","etag":null,"topics":["chemoinformatics","pharmacophore-models"],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ci-lab-cz.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2019-11-02T13:06:59.000Z","updated_at":"2024-12-09T03:53:15.000Z","dependencies_parsed_at":"2023-01-23T05:46:06.952Z","dependency_job_id":null,"html_url":"https://github.com/ci-lab-cz/pharmd","commit_stats":null,"previous_names":[],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/ci-lab-cz/pharmd","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ci-lab-cz","download_url":"https://codeload.github.com/ci-lab-cz/pharmd/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/sbom","scorecard":{"id":282387,"data":{"date":"2025-08-11","repo":{"name":"github.com/ci-lab-cz/pharmd","commit":"de31ca18036e043f5e15f359e14cdfd9b0a9f8c6"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":3.2,"checks":[{"name":"Dangerous-Workflow","score":-1,"reason":"no workflows found","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Pinned-Dependencies","score":-1,"reason":"no dependencies found","details":null,"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"Maintained","score":0,"reason":"0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Code-Review","score":1,"reason":"Found 2/11 approved changesets -- score normalized to 1","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Token-Permissions","score":-1,"reason":"No tokens found","details":null,"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Vulnerabilities","score":10,"reason":"0 existing vulnerabilities detected","details":null,"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE.txt:0","Info: FSF or OSI recognized license: BSD 3-Clause \"New\" or \"Revised\" License: LICENSE.txt:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Signed-Releases","score":-1,"reason":"no releases found","details":null,"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 22 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}}]},"last_synced_at":"2025-08-17T16:14:40.310Z","repository_id":44796033,"created_at":"2025-08-17T16:14:40.310Z","updated_at":"2025-08-17T16:14:40.310Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":271895270,"owners_count":24840092,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-24T02:00:11.135Z","response_time":111,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"ci-lab-cz","name":"Chemical intelligence lab","uuid":"56028890","kind":"organization","description":"Chemoinformatics and drug design group at IMTM UPOL","email":null,"website":"https://imtm.cz/research-groups/polishchuk-group","location":"Czech Republic","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/56028890?v=4","repositories_count":4,"last_synced_at":"2023-03-11T12:10:42.031Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/ci-lab-cz","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-15T02:50:08.918Z","updated_at":"2023-03-11T12:10:42.048Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ci-lab-cz","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ci-lab-cz/repositories"},"tags":[{"name":"v0.1.1","sha":"1623c8eb251a17488a58320be50f64b05ed5d1d4","kind":"tag","published_at":"2019-12-16T08:28:49.000Z","download_url":"https://codeload.github.com/ci-lab-cz/pharmd/tar.gz/v0.1.1","html_url":"https://github.com/ci-lab-cz/pharmd/releases/tag/v0.1.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/ci-lab-cz/pharmd@v0.1.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/tags/v0.1.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/tags/v0.1.1/manifests"},{"name":"v0.1","sha":"472abc44c3550166fd12141aa63297aa6718a636","kind":"commit","published_at":"2019-11-02T13:41:19.000Z","download_url":"https://codeload.github.com/ci-lab-cz/pharmd/tar.gz/v0.1","html_url":"https://github.com/ci-lab-cz/pharmd/releases/tag/v0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/ci-lab-cz/pharmd@v0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/tags/v0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/tags/v0.1/manifests"}]},"repo_metadata_updated_at":"2025-08-24T15:13:52.871Z","dependent_packages_count":0,"downloads":14,"downloads_period":"last-month","dependent_repos_count":1,"rankings":{"downloads":53.41796106535745,"dependent_repos_count":21.71838761843193,"dependent_packages_count":10.002282794063202,"stargazers_count":12.631894093217314,"forks_count":9.333980780045334,"docker_downloads_count":null,"average":21.420901270223048},"purl":"pkg:pypi/pharmd","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/pharmd","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/pharmd","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/pharmd/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-06-11T12:11:42.540Z","issues_count":5,"pull_requests_count":4,"avg_time_to_close_issue":91678.0,"avg_time_to_close_pull_request":17266286.0,"issues_closed_count":1,"pull_requests_closed_count":4,"pull_request_authors_count":3,"issue_authors_count":3,"avg_comments_per_issue":4.4,"avg_comments_per_pull_request":1.0,"merged_pull_requests_count":3,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":2,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":91678.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.5,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/pharmd/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/pharmd/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/pharmd/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/pharmd/related_packages","maintainers":[{"uuid":"DrDom","login":"DrDom","name":null,"email":null,"url":null,"packages_count":10,"html_url":"https://pypi.org/user/DrDom/","role":null,"created_at":"2023-02-25T00:27:18.161Z","updated_at":"2023-02-25T00:27:18.161Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/DrDom/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":726167,"maintainers_count":308802,"namespaces_count":0,"keywords_count":238245,"github":"pypi","metadata":{"funded_packages_count":50579},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-08T05:32:36.857Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}}],"commits":{"id":628245,"full_name":"ci-lab-cz/pharmd","default_branch":"master","committers":[{"name":"Pavel Polishchuk","email":"pavel_polishchuk@ukr.net","login":null,"count":10}],"total_commits":10,"total_committers":1,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":10.0,"dds":0.0,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2023-10-25T14:30:36.619Z","last_synced_commit":"ec0fafedc6e6e6f57479a3e9c93dd16abd3817e2","created_at":"2023-03-09T08:16:17.385Z","updated_at":"2023-10-25T14:30:36.620Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5483992,"commits_count":854420992,"contributors_count":31151709,"owners_count":909079,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"ci-lab-cz/pharmd","html_url":"https://github.com/ci-lab-cz/pharmd","last_synced_at":"2025-08-24T15:18:18.155Z","status":"error","issues_count":5,"pull_requests_count":4,"avg_time_to_close_issue":91678.0,"avg_time_to_close_pull_request":17266286.0,"issues_closed_count":1,"pull_requests_closed_count":4,"pull_request_authors_count":3,"issue_authors_count":3,"avg_comments_per_issue":4.4,"avg_comments_per_pull_request":1.0,"merged_pull_requests_count":3,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":2,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":91678.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.5,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-14T20:05:30.405Z","updated_at":"2025-09-01T20:51:53.478Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/ci-lab-cz%2Fpharmd/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":5},"pull_request_author_associations_count":{"NONE":3,"CONTRIBUTOR":1},"issue_authors":{"sherifelsabbagh":3,"lotus0905":1,"SuparnaGhosh01":1},"pull_request_authors":{"meddwl":2,"DrrDom":1,"stsouko":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-04T00:00:25.939Z","repositories_count":10080966,"issues_count":31268296,"pull_requests_count":96067200,"authors_count":10693694,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"WatchEvent":2},"last_year":{"WatchEvent":2}},"keywords":["chemoinformatics","pharmacophore-models"],"dependencies":[{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2022-09-02T10:12:01.990Z","updated_at":"2022-09-02T10:12:01.990Z","repository_link":"https://github.com/ci-lab-cz/pharmd/blob/master/setup.py","dependencies":[{"id":3596435545,"package_name":"pmapper","ecosystem":"pypi","requirements":"\u003e=0.3","direct":true,"kind":"runtime","optional":false},{"id":3596435546,"package_name":"psearch","ecosystem":"pypi","requirements":"\u003e=0.0.2","direct":true,"kind":"runtime","optional":false},{"id":3596435547,"package_name":"plip","ecosystem":"pypi","requirements":"\u003e=1.4.2","direct":true,"kind":"runtime","optional":false},{"id":3596435548,"package_name":"mdtraj","ecosystem":"pypi","requirements":"\u003e=1.9.3","direct":true,"kind":"runtime","optional":false}]}],"score":6.3835066348840055,"created_at":"2025-09-08T11:19:02.525Z","updated_at":"2025-10-07T08:25:47.209Z","avatar_url":"https://github.com/ci-lab-cz.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":14,"funding_links":[],"readme_doi_urls":["https://doi.org/10.3390/ijms20235834"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/69539","html_url":"https://science.ecosyste.ms/projects/69539"}