dada2_ernakovichlab

https://github.com/ernakovichlab/dada2_ernakovichlab

Science Score: 44.0%

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CITATION.cff file
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codemeta.json file
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Last synced: 10 months ago · JSON representation ·

Repository

Basic Info

Host: GitHub
Owner: ErnakovichLab
License: other
Language: HTML
Default Branch: main
Size: 134 MB

Statistics

Stars: 17
Watchers: 1
Forks: 5
Open Issues: 4
Releases: 0

Created over 4 years ago · Last pushed 10 months ago

Metadata Files

Readme License Citation

README.md

dada2tutorial16S_all.md

Owner

Name: The Ernakovich Lab
Login: ErnakovichLab
Kind: organization

Repositories: 2
Profile: https://github.com/ErnakovichLab

The official github page of the Ernakovich Lab Group

Citation (CITATION.cff)

# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!

cff-version: 1.2.0
title: dada2 tutorial with NovaSeq dataset for Ernakovich Lab
message: >-
  If you use this software, please cite it using the
  metadata from this file.
type: software
authors:
  - given-names: Hannah
    family-names: Holland-Moritz
    email: hhollandmoritz@gmail.com
    affiliation: University of New Hampshire
    orcid: 'https://orcid.org/0000-0002-0854-872X'
  - given-names: Angela
    family-names: Oliverio
    email: amoliver@syr.edu
    affiliation: Syracuse University
    orcid: 'https://orcid.org/0000-0002-0261-0393'
  - given-names: Corinne
    family-names: Walsh
    orcid: 'https://orcid.org/0000-0003-2116-4859'
    affiliation: 'University of Colorado, Boulder'
    email: corinne.walsh@colorado.edu
  - given-names: Matthew
    family-names: Gebert
    email: matthew.gebert@colorado.edu
    affiliation: 'University of Colorado, Boulder'
  - given-names: Kunkun
    family-names: Fan
    email: kkfan@issas.ac.cn
    affiliation: ' Institute of Soil Science, Chinese Academy of Sciences'
  - given-names: Jessica
    family-names: Ernakovich
    email: jessica.ernakovich@unh.edu
    affiliation: University of New Hampshire
    orcid: 'https://orcid.org/0000-0002-4493-2489'
identifiers:
  - type: url
    value: 'https://github.com/ErnakovichLab/dada2_ernakovichlab'
    description: Github Repository for Ernakovich Lab Dada2 tutorial
repository-code: 'https://github.com/ErnakovichLab/dada2_ernakovichlab'
abstract: >-
  This pipeline runs the dada2 workflow for Big Data
  (paired-end) with modifications for NovaSeq sequencing
  base calls
keywords:
  - 'dada2, amplicon sequencing, novaseq, error model'
license: CC-BY-NC-SA-4.0

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