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trackeddy

Tracking eddy algorithm:

https://github.com/josuemtzmo/trackeddy

Science Score: 49.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 3 DOI reference(s) in README
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 3 committers (33.3%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (15.2%) to scientific vocabulary

Keywords

eddies eddy extraction ocean oceanic-eddies
Last synced: 6 months ago · JSON representation

Repository

Tracking eddy algorithm:

Basic Info
Statistics
  • Stars: 51
  • Watchers: 4
  • Forks: 19
  • Open Issues: 11
  • Releases: 1
Topics
eddies eddy extraction ocean oceanic-eddies
Created over 8 years ago · Last pushed over 1 year ago
Metadata Files
Readme License Citation

README.md

TrackEddy (Eddy Identification Algorithm)

| Travis CI (Python 3.6) | Read the Docs | Code Coverage | |:----------------------:|:-------------:|:-------------:| | Build Status | Documentation Status | codecov |

Supports Python 2.7 and Python 3 This code will let you identify and track any normal shape in a 2D space. The principal objective of this development is finding and tracking all the eddies in the ocean.

Alt Text

v1.0 Release:

The source code supports the extraction of eddies each time step and moving in vertical coordinate Z.

Alt Text

Installing TrackEddy

  1. Make a new directory where you want the repository.
  2. Clone the TrackEddy repository from Github. In the command prompt, type: git clone https://github.com/Josue-Martinez-Moreno/trackeddy.git
  3. Install the package globally: pip install -e . This make the package an editable install so that it can be updated with future additions to TrackEddy. To instead install the package locally: pip install --user .

Updating TrackEddy

  1. Move into your TrackEddy directory.
  2. Update your GitHub repository. git pull
  3. Edit your install of TrackEddy. pip install -e . or pip install --force-reinstall -e . or, for local installation: pip install --ignore-installed --user .

Read more about TrackEddy in

  • Martnez-Moreno, J., Hogg, A. McC., Kiss, A. E., Constantinou, N. C., and Morrison, A. K. (2019). Kinetic energy of eddy-like features from sea surface altimetry. Journal of Advances in Modeling Earth Systems, 11(10), 3090-3105. doi:10.1029/2019MS001769

References:

  • Faghmous, J. H., Frenger, I., Yao, Y., Warmka, R., Lindell, A., & Kumar, V. (2015). A daily global mesoscale ocean eddy dataset from satellite altimetry. Scientific Data, 2, 150028.
  • Chang, Y. L., & Oey, L. Y. (2014). Analysis of STCC eddies using the OkuboWeiss parameter on model and satellite data. Ocean Dynamics, 64(2), 259-271.
  • Chelton, D. B., Schlax, M. G., Samelson, R. M., & de Szoeke, R. A. (2007). Global observations of large oceanic eddies. Geophysical Research Letters, 34(15), L15606.

Owner

  • Name: Josué Martínez Moreno
  • Login: josuemtzmo
  • Kind: user
  • Location: Brest, France
  • Company: IFREMER

GitHub Events

Total
  • Watch event: 4
  • Push event: 1
Last Year
  • Watch event: 4
  • Push event: 1

Committers

Last synced: 10 months ago

All Time
  • Total Commits: 129
  • Total Committers: 3
  • Avg Commits per committer: 43.0
  • Development Distribution Score (DDS): 0.209
Past Year
  • Commits: 23
  • Committers: 1
  • Avg Commits per committer: 23.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Josue-Martinez-Moreno j****o@a****u 102
josuemtzmo j****o@g****m 23
Navid C. Constantinou n****y 4
Committer Domains (Top 20 + Academic)
anu.edu.au: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 15
  • Total pull requests: 5
  • Average time to close issues: 3 days
  • Average time to close pull requests: 3 months
  • Total issue authors: 5
  • Total pull request authors: 2
  • Average comments per issue: 1.53
  • Average comments per pull request: 1.2
  • Merged pull requests: 5
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • hafez-ahmad (4)
  • navidcy (3)
  • JoMaHoPo (3)
  • qjuanr (3)
  • josuemtzmo (2)
Pull Request Authors
  • josuemtzmo (3)
  • navidcy (3)
Top Labels
Issue Labels
low priority (1) bug (1) high priority (1) cool issue (1) enhancement (1) known issue (1)
Pull Request Labels

Dependencies

docs/environment.yml conda
  • astropy
  • cartopy
  • cmocean
  • gsw
  • matplotlib
  • netcdf4
  • nose
  • numpy
  • numpydoc 0.8.0.*
  • pandas
  • pillow 5.4.1.*
  • pytest
  • pytest-cov
  • python 3.7.*
  • scipy
  • seawater
  • sphinx 1.8.2.*
  • sphinx-gallery 0.2.0.*
  • sphinx_rtd_theme 0.4.2.*
  • sympy
  • xarray