Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/alexslemonade/resources-portal

https://github.com/alexslemonade/resources-portal

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (12.2%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Basic Info
Statistics
  • Stars: 1
  • Watchers: 6
  • Forks: 1
  • Open Issues: 93
  • Releases: 0
Created over 6 years ago · Last pushed over 1 year ago
Metadata Files
Readme Funding License

README.md

resources_portal

Build Status Portal for pediatric cancer researchers to discover and manage sharing of resources like cell lines, datasets, scientific code, etc. Built with

Resources Portal. Check out the project's documentation.

Prerequisites

Optional

You can run the rportal command with ./bin/rportal from the root directory of this project. Optionally you can add this project's /bin folder to your path and then call it directly.

Local Development

Start the dev server for local development:

bash rportal up

See the README for the API for more information and commands.

pre-commit can run linting on all committed files for you automatically on every commit. To enable this behavior, run pre-commit install in the root directory. This will require installing pre-commit if you have not already done so.

Cloud Development

The staging stack will be redeployed upon every merge to dev. The production stack has not yet been configured.

For instructions on how to deploy a development stack see the infrastructure README.

Testing

To populate the dev database with some realistic data, please run:

bash rportal populate-db

To clear the database, run:

bash rportal recreate-schema

See the README for the test data for a description of the test dataset.

Account Creation

Users can create accounts by signing in through ORCID using the button in the website's header. Accounts with associated grants can also be created by passing URL parameters to the /create-account endpoint, as documented in the account creation README.

ORCID OAUTH

Resources Portal uses ORCID OAUTH to create accounts and sign in users. You can find documentation for it in the OAUTH README.

Owner

  • Name: Alex's Lemonade Stand Foundation
  • Login: AlexsLemonade
  • Kind: organization

Childhood Cancer Data Lab of ALSF

GitHub Events

Total
  • Issues event: 5
  • Delete event: 4
  • Issue comment event: 11
  • Push event: 17
  • Pull request event: 16
  • Create event: 5
Last Year
  • Issues event: 5
  • Delete event: 4
  • Issue comment event: 11
  • Push event: 17
  • Pull request event: 16
  • Create event: 5

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 2
  • Total pull requests: 3
  • Average time to close issues: about 1 year
  • Average time to close pull requests: 1 minute
  • Total issue authors: 1
  • Total pull request authors: 1
  • Average comments per issue: 2.5
  • Average comments per pull request: 1.0
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 3
  • Average time to close issues: 15 days
  • Average time to close pull requests: 1 minute
  • Issue authors: 1
  • Pull request authors: 1
  • Average comments per issue: 1.0
  • Average comments per pull request: 1.0
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • davidsmejia (4)
Pull Request Authors
  • davidsmejia (6)
  • arkid15r (2)
  • nozomione (1)
Top Labels
Issue Labels
High Priority (1)
Pull Request Labels

Dependencies

client/package.json npm
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  • @babel/eslint-parser ^7.11.4 development
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client/yarn.lock npm
  • 1387 dependencies
api/requirements.txt pypi
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  • factory-boy ==2.12.0
  • flake8 ==3.7.9
  • furl ==2.1.0
  • gunicorn ==20.0.4
  • ipdb ==0.12.3
  • ipython ==7.11.1
  • mkdocs ==1.0.4
  • mock ==3.0.5
  • newrelic ==5.4.1.134
  • orcid ==1.0.3
  • premailer ==3.7.0
  • psycopg2-binary ==2.8.4
  • pytz ==2019.3
  • requests ==2.23.0
  • requests-aws4auth ==1.0.1
  • retrying ==1.3.3
  • sentry-sdk ==0.18.0
  • uwsgi ==2.0.18
.github/workflows/deploy_prod_backend.yml actions
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.github/workflows/deploy_staging_backend.yml actions
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.github/workflows/docs.yml actions
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.github/workflows/lint.yml actions
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.github/workflows/push.yml actions
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docker-compose.yml docker
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  • docker.elastic.co/elasticsearch/elasticsearch 6.5.4
  • node 14.2
  • postgres 11.6
  • squidfunk/mkdocs-material latest