https://github.com/almaaslab/bigmec - Minor updates on documentation++

• Update README
• Update requirements with lxml package
• Update exception handling in getmibig.py_
• Add notebook for BGC type analysis

- Jupyter Notebook
Published by sulheim over 5 years ago

https://github.com/almaaslab/bigmec - Small patch

Fix name error of methoxymalonyl-ACP and adds the calculation of correlations.

- Jupyter Notebook
Published by sulheim over 5 years ago

https://github.com/almaaslab/bigmec - BiGMeC first release!

Evaluated pipeline for NRPS and PKS gene clusters with a total accuracy of 72.8% in predicting the domain function. In addition to the pipeline itself, the release also covers scripts used to make figures, get GenBank files from MiBiG and predict strain engineering strategies. The repository also contains all MIBiG BGC clusters as GenBank files, the contructed pathways and the optknock results.

- Jupyter Notebook
Published by sulheim over 5 years ago