EDP

EDP: a program for projecting electron densities from VASP onto planes - Published in JOSS (2023)

https://github.com/ifilot/edp

Science Score: 98.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 7 DOI reference(s) in README and JOSS metadata
  • Academic publication links
    Links to: joss.theoj.org, zenodo.org
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
    Published in Journal of Open Source Software

Keywords

color-scheme density electron-density vasp visualization

Keywords from Contributors

mesh
Last synced: 4 months ago · JSON representation ·

Repository

Electron Density Plotter

Basic Info
Statistics
  • Stars: 38
  • Watchers: 2
  • Forks: 4
  • Open Issues: 4
  • Releases: 1
Topics
color-scheme density electron-density vasp visualization
Created about 8 years ago · Last pushed 11 months ago
Metadata Files
Readme Contributing License Citation

README.md

EDP: a program for projecting electron densities from VASP onto planes

GitHub tag (latest SemVer) Build Documentation License: GPL v3 status DOI

  • Detailed documentation can be found at https://ifilot.github.io/edp/.
  • See the contributing guide for detailed instructions how to make contributions.
  • Bugs and feature requests are ideally submitted via the gitlab issue tracker.
  • The development team can also be reached by email via i.a.w.filot@tue.nl.

If you make use of this program, please use the following to cite it:

bibtex @article{Filot2023, doi = {10.21105/joss.05417}, url = {https://doi.org/10.21105/joss.05417}, year = {2023}, publisher = {The Open Journal}, volume = {8}, number = {87}, pages = {5417}, author = {I.a.w. Filot}, title = {EDP: a program for projecting electron densities from VASP onto planes}, journal = {Journal of Open Source Software} }

Purpose

EDP is a C++ program designed to project the electron density as stored in a CHGCAR or PARCHG file (calculated in VASP, onto a plane.

With EDP, users can effortlessly define the projection plane based on atomic positions while also having the option for detailed customization of the plane's position and direction. Its versatility and ease of use make EDP a handy tool for researchers in the field of materials science.

molecular orbitals of benzene

Features

Easy command line instructions

By referring to the atomic coordinates, one can easily define the projection plane and produce nice and clear images.

bash edp -i PARCHG_BENZENE_07 -o benzene_xy.png -p 1 -v 1,0,0 -w 0,1,0 -s 25 -b -5,0 -l

molecular orbitals of benzene

Large variety of color schemes

EDP supports 16 different color schemes.

molecular orbitals of benzene

Owner

  • Name: Ivo Filot
  • Login: ifilot
  • Kind: user
  • Location: Eindhoven, The Netherlands
  • Company: Eindhoven University of Technology

Ivo Filot is a theoretical chemist originating from the Netherlands. His research involves the elucidation of complex chemokinetic networks.

JOSS Publication

EDP: a program for projecting electron densities from VASP onto planes
Published
July 06, 2023
Volume 8, Issue 87, Page 5417
Authors
I.a.w. Filot ORCID
Inorganic Materials and Catalysis, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology
Editor
Rachel Kurchin ORCID
Tags
Electron density Charge density VASP Projection

Citation (CITATION.cff)

cff-version: "1.2.0"
authors:
- family-names: Filot
  given-names: I. A. W.
  orcid: "https://orcid.org/0000-0003-1403-8379"
contact:
- family-names: Filot
  given-names: I. A. W.
  orcid: "https://orcid.org/0000-0003-1403-8379"
doi: 10.5281/zenodo.8104498
message: If you use this software, please cite our article in the
  Journal of Open Source Software.
preferred-citation:
  authors:
  - family-names: Filot
    given-names: I. A. W.
    orcid: "https://orcid.org/0000-0003-1403-8379"
  date-published: 2023-07-06
  doi: 10.21105/joss.05417
  issn: 2475-9066
  issue: 87
  journal: Journal of Open Source Software
  publisher:
    name: Open Journals
  start: 5417
  title: "EDP: a program for projecting electron densities from VASP
    onto planes"
  type: article
  url: "https://joss.theoj.org/papers/10.21105/joss.05417"
  volume: 8
title: "EDP: a program for projecting electron densities from VASP onto
  planes"

GitHub Events

Total
  • Issues event: 2
  • Watch event: 4
  • Delete event: 1
  • Push event: 2
Last Year
  • Issues event: 2
  • Watch event: 4
  • Delete event: 1
  • Push event: 2

Committers

Last synced: 5 months ago

All Time
  • Total Commits: 132
  • Total Committers: 3
  • Avg Commits per committer: 44.0
  • Development Distribution Score (DDS): 0.303
Past Year
  • Commits: 3
  • Committers: 2
  • Avg Commits per committer: 1.5
  • Development Distribution Score (DDS): 0.333
Top Committers
Name Email Commits
ifilot i****o@i****l 92
ifilot i****o@z****l 38
dependabot[bot] 4****] 2
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 4 months ago

All Time
  • Total issues: 10
  • Total pull requests: 18
  • Average time to close issues: 15 days
  • Average time to close pull requests: about 6 hours
  • Total issue authors: 7
  • Total pull request authors: 2
  • Average comments per issue: 1.9
  • Average comments per pull request: 0.0
  • Merged pull requests: 18
  • Bot issues: 0
  • Bot pull requests: 2
Past Year
  • Issues: 2
  • Pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: 3 minutes
  • Issue authors: 1
  • Pull request authors: 1
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 1
Top Authors
Issue Authors
  • KylinGuo (2)
  • mlorke (2)
  • b-zijlstra (2)
  • N0ema (1)
  • filipejunqueira (1)
  • ifilot (1)
  • mgdotdev (1)
Pull Request Authors
  • ifilot (16)
  • dependabot[bot] (3)
Top Labels
Issue Labels
enhancement (4) help wanted (2) bug (1)
Pull Request Labels
enhancement (5) dependencies (3) bug (3) github_actions (2)