https://github.com/ameynert/dna-alignment-pipeline
DNA alignment pipeline tailored to IGMM compute cluster
Science Score: 23.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
2 of 2 committers (100.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (1.6%) to scientific vocabulary
Last synced: 11 months ago
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JSON representation
Repository
DNA alignment pipeline tailored to IGMM compute cluster
Basic Info
- Host: GitHub
- Owner: ameynert
- Language: Perl
- Default Branch: master
- Size: 30.3 KB
Statistics
- Stars: 2
- Watchers: 0
- Forks: 0
- Open Issues: 0
- Releases: 0
Created about 11 years ago
· Last pushed over 9 years ago
Metadata Files
Readme
README.md
Alignment and variant calling pipeline designed for high throughput sequencing of genomic DNA, either whole genome or targeted. An adaptation of the Genome Analysis Toolkit Best Practices (https://www.broadinstitute.org/gatk/guide/best-practices?bpm=DNAseq) tailored to the University of Edinburgh's Institute of Genetics and Molecular Medicine compute cluster.
Owner
- Name: Alison Meynert
- Login: ameynert
- Kind: user
- Repositories: 27
- Profile: https://github.com/ameynert
GitHub Events
Total
Last Year
Committers
Last synced: over 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| Alison Meynert | a****t@i****k | 19 |
| MEYNERT Alison | a****2@l****k | 6 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: about 1 year ago
All Time
- Total issues: 0
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0