icarust - RNA and POD5 implementation

Highlights

• RNA implementation - We can now simulate RNA002. Work is ongoing for RNA004.
• Own TLS certs mean that we don't have to require a MinKNOW installation.
• Write out uncompressed POD5.

What's Changed

• Feature/roll ur own tls by @Adoni5 in https://github.com/LooseLab/Icarust/pull/7
• Feature/pod5 output by @Adoni5 in https://github.com/LooseLab/Icarust/pull/8
• implementation for RNA by @satriobio in https://github.com/LooseLab/Icarust/pull/6

New Contributors

• @Adoni5 made their first contribution in https://github.com/LooseLab/Icarust/pull/7
• @satriobio made their first contribution in https://github.com/LooseLab/Icarust/pull/6

Full Changelog: https://github.com/LooseLab/Icarust/compare/v0.4...v0.0.6

- Rust
Published by Adoni5 over 2 years ago

icarust - Readfish 2023.1.0 compatibility

Highlights

This is a small update to implement the new MinKNOW API endpoints called by readfish in it's latest release.

[!NOTE] Whilst this will work with previous versions of readfish, versions of Icarust < 0.4 will NOT work with readfish >= 2023.1.0.

The data returned currently is mostly just what is required to make readfish run, but there are eyes on the prize to make them dynamic to more closely reflect the stages of MinKNOW based sequencing.

Full Changelog: https://github.com/LooseLab/Icarust/commits/v0.4

- Rust
Published by Adoni5 over 2 years ago

icarust - V0.3

Official 0.3 release mirror. Working barcoding.

- Rust
Published by Adoni5 almost 4 years ago