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laboratory-tests-preprocessing

https://github.com/filipeloyola/laboratory-tests-preprocessing

Science Score: 54.0%

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    CITATION.cff file
    Found CITATION.cff file
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    Links to: zenodo.org
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    Scientific vocabulary similarity
    Low similarity (4.1%) to scientific vocabulary
Last synced: 10 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: filipeloyola
  • License: mit
  • Language: Jupyter Notebook
  • Default Branch: main
  • Size: 465 KB
Statistics
  • Stars: 2
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 1
Created over 4 years ago · Last pushed 12 months ago
Metadata Files
Readme License Citation

README.md

laboratory-tests-preprocessing

DOI

Preprocessing laboratory tests results data by COVID-19 patients from Hospital Sirio Libanes. This repository contains one Jupyter notebook and one .csv file.

Original data

This work used original data from COVID-19 Data Sharing/BR FAPESP, available at https://repositoriodatasharingfapesp.uspdigital.usp.br/, referent to Sirio Libanes hospital from Sao Paulo, Brazil.

Jupyter Notebook

File containing filters steps to preprocessing. Patients were labeled according to the origin of laboraty tests, as shown below:

  • GROUP0 - patients with exams coming only from the emergency room (NOSEVERE);

  • GROUP1 - patients with exams from the emergency room and hospitalization (NOSEVERE);

  • GROUP_2 - patients with exams from the emergency room and ICU (SEVERE);

  • GROUP_3 - patients with exams from the emergency room, hospitalization and ICU (SEVERE).

.csv file

Contains the data resulted from preprocessing described in the notebook. Next are the main characteristics of the output dataset: - File name: sirioaprendizadov3.csv - Missing rate: 13.2% - Instances: 4320 - Classes: 2 (SEVERE and NO_SEVERE) - Features categorical: 2 - Features continous: 2

Owner

  • Name: Filipe Loyola Lopes
  • Login: filipeloyola
  • Kind: user

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Lopes"
  given-names: "Filipe Loyola"
  orcid: "https://orcid.org/0000-0002-4172-6532"
- family-names: "Lorena"
  given-names: "Ana Carolina"
  orcid: "https://orcid.org/0000-0002-6140-571X"
title: "Laboratory tests preprocessing"
version: 0.1.0
doi: 10.5281/zenodo.6392307
date-released: 2022-03-28
url: "https://doi.org/10.5281/zenodo.6392307"

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