autopas
Autopas is a node-level auto-tuned particle simulation library developed in the context of the TaLPas project.
Science Score: 54.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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✓Academic publication links
Links to: sciencedirect.com, ieee.org -
○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (12.5%) to scientific vocabulary
Keywords
Repository
Autopas is a node-level auto-tuned particle simulation library developed in the context of the TaLPas project.
Basic Info
- Host: GitHub
- Owner: AutoPas
- License: bsd-2-clause
- Language: C++
- Default Branch: master
- Homepage: https://autopas.github.io
- Size: 179 MB
Statistics
- Stars: 39
- Watchers: 3
- Forks: 10
- Open Issues: 141
- Releases: 2
Topics
Metadata Files
README.md
AutoPas is a node-level auto-tuned particle simulation library developed
in the context of the TaLPas project.
Documentation
The documentation can be found at our website: https://autopas.github.io/doxygen_documentation/git-master/
Alternatively, you can build the documentation on your own:
* Requirements: Doxygen
* make doc_doxygen
Examples
As AutoPas is only a library, it is not able to run simulations by itself. We have, however, included a few example proxy applications in the examples directory. The examples include: * md-flexible: Molecular dynamics simulations with single centered Lennard-Jones particles. * Smoothed particle hydrodynamics simulations
Using AutoPas
Please look at our user documentation pages.
Developing AutoPas
- Please look at our contribution guidelines.
- A guide on how to build AutoPas can be found here.
Acknowledgements
This work was financially supported by: * Federal Ministry of Education and Research, Germany, project "Task-based load balancing and auto-tuning in particle simulations" (TaLPas) 8, grant numbers 01IH16008A and 01IH16008B. * Federal Ministry of Education and Research, Germany, project "Verbundprojekt: Simulationssoftware für Exascale-Supercomputer zur Berechnung von Dreikörperwechselwirkungen" (3xa), grant number 16ME0652K. * Federal Ministry of Defense, Germany, through Helmut-Schmidt-Universität, project "Makro/Mikro-Simulation des Phasenzerfalls im Transkritischen Bereich" (MaST). * Federal Ministry of Education and Research, Germany, project "Verbundprojekt: In Windkraftanlagen integrierte Second-Life-Rechencluster" (WindHPC), grant number 16ME0611.
Papers to cite
- F. A. Gratl, S. Seckler, H.-J. Bungartz and P. Neumann: N Ways to Simulate Short-Range Particle Systems: Automated Algorithm Selection with the Node-Level Library AutoPas, In Computer Physics Communications, Volume 273, 2022. (BibTeX, MediaTUM)
- F. A. Gratl, S. Seckler, N. Tchipev, H.-J. Bungartz and P. Neumann: AutoPas: Auto-Tuning for Particle Simulations, In 2019 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), Rio de Janeiro, May 2019. (BibTeX, MediaTUM)
- S. Seckler, F. Gratl, M. Heinen, J. Vrabec, H.-J. Bungartz, P. Neumann: AutoPas in ls1 mardyn: Massively parallel particle simulations with node-level auto-tuning, In Journal of Computational Science, Volume 50, 2021. (BibTeX, MediaTUM)
Owner
- Name: AutoPas
- Login: AutoPas
- Kind: organization
- Repositories: 7
- Profile: https://github.com/AutoPas
Citation (CITATION.cff)
cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Gratl"
given-names: "Fabio Alexander"
orcid: "https://orcid.org/0000-0001-5195-7919"
- family-names: "Newcome"
given-names: "Samuel James"
orcid: "https://orcid.org/0000-0003-3044-6057"
title: "AutoPas"
version: 1.0.0
# doi: No doi included
date-released: 2020-11-10
url: "https://github.com/AutoPas/AutoPas"
preferred-citation:
type: article
authors:
- family-names: "Gratl"
given-names: "Fabio Alexander"
orcid: "https://orcid.org/0000-0001-5195-79190"
- family-names: "Seckler"
given-names: "Steffan"
orcid: "https://orcid.org/0000-0003-1143-6283"
- family-names: "Bungartz"
given-names: "Han-Joachim"
orcid: "https://orcid.org/0000-0002-0171-0712"
- family-names: "Neumann"
given-names: "Philipp"
orcid: "https://orcid.org/0000-0001-8604-8846"
doi: "https://doi.org/10.1016/j.cpc.2021.1082620"
journal: "Computer Physics Communications"
month: 4
start: 108262 # ID of the article
title: "N ways to simulate short-range particle systems: Automated algorithm selection with the node-level library AutoPas"
volume: 273
year: 2022
GitHub Events
Total
- Create event: 79
- Release event: 1
- Issues event: 31
- Watch event: 4
- Delete event: 31
- Issue comment event: 469
- Push event: 1,119
- Gollum event: 1
- Pull request review comment event: 241
- Pull request event: 71
- Pull request review event: 269
- Fork event: 3
Last Year
- Create event: 79
- Release event: 1
- Issues event: 31
- Watch event: 4
- Delete event: 31
- Issue comment event: 469
- Push event: 1,119
- Gollum event: 1
- Pull request review comment event: 241
- Pull request event: 71
- Pull request review event: 269
- Fork event: 3
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 13
- Total pull requests: 31
- Average time to close issues: almost 2 years
- Average time to close pull requests: 3 months
- Total issue authors: 6
- Total pull request authors: 14
- Average comments per issue: 0.85
- Average comments per pull request: 1.84
- Merged pull requests: 14
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 8
- Pull requests: 29
- Average time to close issues: 20 days
- Average time to close pull requests: about 2 months
- Issue authors: 4
- Pull request authors: 14
- Average comments per issue: 0.38
- Average comments per pull request: 1.07
- Merged pull requests: 12
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- FG-TUM (23)
- SamNewcome (21)
- thesamriel (12)
- manishmishra6016 (7)
- SteffenSeckler (5)
- xhulia028 (1)
- YasperFa (1)
- MehdiHachicha (1)
- HobbyProgrammer (1)
- ManuelLerchner (1)
- ireneangelucci (1)
Pull Request Authors
- FG-TUM (35)
- SamNewcome (23)
- thesamriel (17)
- dmartin13 (14)
- ireneangelucci (12)
- manishmishra6016 (10)
- schuhmaj (6)
- ManuelLerchner (4)
- TumBeat (3)
- rlawnsiiiii (2)
- JannikHoog (2)
- hoppef (1)
- santiagonar1 (1)
- AshIsAtWork (1)
- Johannes-Rief (1)
Top Labels
Issue Labels
Pull Request Labels
Dependencies
- DoozyX/clang-format-lint-action v0.12 composite
- actions/checkout v2 composite
- actions/checkout v2 composite
- docker://autopas/autopas-build-doxygen * composite
- peaceiris/actions-gh-pages v3.7.2 composite