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Open Source Science

https://github.com/amypad/spm12

Python wrapper around MATLAB and SPM12

https://github.com/amypad/spm12

Science Score: 59.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 3 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ✓
    Committers with academic emails
    1 of 3 committers (33.3%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (8.0%) to scientific vocabulary

Keywords

image-registration matlab medical-imaging python

Keywords from Contributors

mr pet processing
Last synced: 6 months ago · JSON representation

Repository

Python wrapper around MATLAB and SPM12

Basic Info
  • Host: GitHub
  • Owner: AMYPAD
  • License: other
  • Language: Python
  • Default Branch: master
  • Homepage:
  • Size: 226 KB
Statistics
  • Stars: 10
  • Watchers: 6
  • Forks: 3
  • Open Issues: 5
  • Releases: 11
Topics
image-registration matlab medical-imaging python
Created over 5 years ago · Last pushed 6 months ago
Metadata Files
Readme Contributing

README.rst 

SPM12
=====

|Version| |Py-Versions| |Tests| |Coverage| |DOI| |LICENCE|

Thin Python wrappers around `Statistical Parametric Mapping `_.

|PET-MR Coregistration|


Install
-------

Currently requires MATLAB. May change in future.

.. code:: sh

    python -m pip install -U spm12
    python -m spm12


Examples
--------

See `examples/demo.ipynb `_.


Contributing
------------

See `CONTRIBUTING.md `_.

.. |PET-MR Coregistration| image:: https://raw.githubusercontent.com/AMYPAD/images/master/spm12/pet_mr_coreg.png
.. |Tests| image:: https://img.shields.io/github/actions/workflow/status/AMYPAD/SPM12/test.yml?branch=master&logo=GitHub
   :target: https://github.com/AMYPAD/SPM12/actions
.. |Coverage| image:: https://codecov.io/gh/AMYPAD/SPM12/branch/master/graph/badge.svg
   :target: https://codecov.io/gh/AMYPAD/SPM12
.. |Version| image:: https://img.shields.io/pypi/v/spm12.svg?logo=python&logoColor=white
   :target: https://github.com/AMYPAD/SPM12/releases
.. |Py-Versions| image:: https://img.shields.io/pypi/pyversions/spm12.svg?logo=python&logoColor=white
   :target: https://pypi.org/project/spm12
.. |DOI| image:: https://zenodo.org/badge/DOI/10.5281/zenodo.4272003.svg
   :target: https://doi.org/10.5281/zenodo.4272003
.. |LICENCE| image:: https://img.shields.io/pypi/l/spm12.svg
   :target: https://raw.githubusercontent.com/AMYPAD/spm12/master/LICENCE.md

Owner

  • Name: AMYPAD
  • Login: AMYPAD
  • Kind: organization
  • Location: Europe

Amyloid imaging to prevent Alzheimer's Disease

GitHub Events

Total
  • Watch event: 2
  • Issue comment event: 1
  • Push event: 6
  • Pull request event: 4
  • Fork event: 2
Last Year
  • Watch event: 2
  • Issue comment event: 1
  • Push event: 6
  • Pull request event: 4
  • Fork event: 2

Committers

Last synced: almost 3 years ago

All Time
  • Total Commits: 104
  • Total Committers: 3
  • Avg Commits per committer: 34.667
  • Development Distribution Score (DDS): 0.135
Top Committers
Name Email Commits
Casper da Costa-Luis c****l@p****g 90
Pawel p****z@u****k 13
Casper da Costa-Luis i****g@c****l 1
Committer Domains (Top 20 + Academic)
cdcl.ml: 1 ucl.ac.uk: 1 physics.org: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 6
  • Total pull requests: 18
  • Average time to close issues: about 2 hours
  • Average time to close pull requests: about 2 months
  • Total issue authors: 1
  • Total pull request authors: 3
  • Average comments per issue: 0.0
  • Average comments per pull request: 1.0
  • Merged pull requests: 16
  • Bot issues: 0
  • Bot pull requests: 3
Past Year
  • Issues: 0
  • Pull requests: 3
  • Average time to close issues: N/A
  • Average time to close pull requests: about 4 hours
  • Issue authors: 0
  • Pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 0.33
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 1
View more stats
Top Authors
Issue Authors
  • casperdcl (6)
Pull Request Authors
  • casperdcl (13)
  • pre-commit-ci[bot] (3)
  • kennyluck (2)
Top Labels
Issue Labels
enhancement (4) framework (1) bug (1) documentation (1)
Pull Request Labels
enhancement (9) framework (6) bug (4) documentation (2)

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 148 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 17
  • Total maintainers: 2
pypi.org: spm12

Statistical Parametric Mapping

  • Versions: 17
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 148 Last month
Rankings
Dependent packages count: 10.0%
Downloads: 14.7%
Average: 15.5%
Dependent repos count: 21.7%
Maintainers (2)
casper.dcl pjmark
Last synced: 6 months ago