multimorbidity_hypergraphs
https://github.com/swanseauniversitymedical/multimorbidity_hypergraphs
Science Score: 67.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: sciencedirect.com, zenodo.org -
○Academic email domains
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (8.8%) to scientific vocabulary
Repository
Basic Info
Statistics
- Stars: 4
- Watchers: 4
- Forks: 0
- Open Issues: 2
- Releases: 5
Metadata Files
README.md
Hypergraphs for Multimorbidity Research
This is a collection of tools for constructing and analysing hypergraphs from data. Hypergraphs are very general and powerful objects for data analysis which connect nodes and edges. As for binary graphs, nodes can conect to any number of edges but in a hypergraph, edges can connect to any number of nodes which leads to some very useful features!
This set of tools is for the analysis of large scale data with hypergraphs, i.e, a specialist toolkit that will focus on a small number of specific features. If you are looking for a general tool kit for hypergraphs including visualisation, check out hypernetx (https://github.com/pnnl/HyperNetX).
A publication describing what this code does can be found here: https://www.sciencedirect.com/science/article/pii/S1532046421002458
Install using pip: pip install multimorbidity-hypergraphs
To import: import multimorbidity_hypergraphs as hgt
Run tests using pytest in the top directory.
Owner
- Name: Swansea University Medical School
- Login: SwanseaUniversityMedical
- Kind: organization
- Repositories: 9
- Profile: https://github.com/SwanseaUniversityMedical
Citation (CITATION.cff)
# YAML 1.2
---
authors:
-
affiliation: "Swansea University Medical School"
family-names: Rafferty
given-names: James
orcid: "https://orcid.org/0000-0002-1667-7265"
-
affiliation: "Swansea University, dept. of Computer Science"
family-names: Bennet
given-names: Ed
orcid: "https://orcid.org/0000-0002-1678-6701"
-
affiliation: "Swansea University Medical School"
family-names: Lee
given-names: Alex
orcid: "https://orcid.org/0000-0001-7916-024X"
cff-version: "1.1.0"
date-released: 2021-10-15
doi: "10.5281/zenodo.5285008"
message: "If you use this software, please cite it using these metadata."
title: "multimorbidity_hypergraphs"
version: "0.3.5"
...
GitHub Events
Total
- Push event: 7
Last Year
- Push event: 7
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 11
- Total pull requests: 0
- Average time to close issues: 11 days
- Average time to close pull requests: N/A
- Total issue authors: 1
- Total pull request authors: 0
- Average comments per issue: 1.18
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 0
- Average comments per issue: 0.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- jim-rafferty (11)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels
Dependencies
- numba >=0.48
- numpy >=1.18
- pandas
- pytest
- pytest-benchmark
- scipy
- statsmodels