https://github.com/andrewdhawan/sigqc
R package for gene signature quality control, available from CRAN
Science Score: 23.0%
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○CITATION.cff file
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✓codemeta.json file
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○.zenodo.json file
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○DOI references
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✓Academic publication links
Links to: nature.com -
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○Scientific vocabulary similarity
Low similarity (4.0%) to scientific vocabulary
Repository
R package for gene signature quality control, available from CRAN
Basic Info
- Host: GitHub
- Owner: andrewdhawan
- License: other
- Language: HTML
- Default Branch: master
- Size: 2.88 MB
Statistics
- Stars: 4
- Watchers: 2
- Forks: 1
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
sigQC
This directory contains source code, sample code, and a vignette describing the methodology for gene signature quality control as defined by the sigQC methodology.
The method is described in detail in protocol format at https://www.nature.com/articles/s41596-019-0136-8, in the article ``Guidelines for using sigQC for systematic evaluation of gene signatures'' by Andrew Dhawan, Alessandro Barberis, Wei-Chen Cheng, Enric Domingo, Catharine West, Tim Maughan, Jacob Scott, Adrian L. Harris, and Francesca M. Buffa.
If using, please cite our work as follows:
Dhawan, Andrew, Alessandro Barberis, Wei-Chen Cheng, Enric Domingo, Catharine West, Tim Maughan, Jacob G. Scott, Adrian L. Harris, and Francesca M. Buffa. ``Guidelines for using sigQC for systematic evaluation of gene signatures.'' Nature protocols 14, no. 5 (2019): 1377-1400.
Owner
- Login: andrewdhawan
- Kind: user
- Repositories: 1
- Profile: https://github.com/andrewdhawan