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https://github.com/animesh/rawr

Brings Orbitrap Mass Spectrometry Data to Life; Multi-platform and Fast package for reading Thermo Fisher data into R.

https://github.com/animesh/rawr

Science Score: 23.0%

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    Found 1 DOI reference(s) in README
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    Links to: biorxiv.org
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    Low similarity (8.2%) to scientific vocabulary
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Repository

Brings Orbitrap Mass Spectrometry Data to Life; Multi-platform and Fast package for reading Thermo Fisher data into R.

Basic Info
  • Host: GitHub
  • Owner: animesh
  • Default Branch: master
  • Homepage:
  • Size: 2.26 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Fork of fgcz/rawrr
Created over 5 years ago · Last pushed over 5 years ago

https://github.com/animesh/rawR/blob/master/ 

![rawRHexSticker](https://github.com/cpanse/rawR/blob/master/rawRcolor10%25.png)

# rawR
R interface for Thermo Fisher Scientifc raw files branched from [rawDiag](https://github.com/fgcz/rawDiag). This package wraps the functionality of the [RawFileReader](https://planetorbitrap.com/rawfilereader) .NET assembly. Within the R environment spectra and chromatograms are represented by S3 objects. All objects are currently kept in memory. Later versions will support on-disc backend processing and laisy evaluation. 

## Install

Please install the latest release from https://github.com/fgcz/rawR/releases according to the provided instructions.

## System requirements

- [R](https://cran.r-project.org/) (>= 4.0)
 
### MS Windows

Make sure that .NET Framework 4.5.1 or higher is installed.

### macOS|Linux

You need to have [Mono](https://www.mono-project.com) installed. Mono is an open source implementation of Microsoft's .NET Framework.

## Manuscripts

https://www.biorxiv.org/content/10.1101/2020.10.30.362533v1

Owner

  • Name: Ani
  • Login: animesh
  • Kind: user
  • Location: Norway
  • Company: Norwegian University of Science and Technology

A medical graduate from Delhi University with post-graduation in bioinformatics from Jawaharlal Nehru University, India.

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