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https://github.com/animesh/clusterprofiler

:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

https://github.com/animesh/clusterprofiler

Science Score: 13.0%

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    Found 4 DOI reference(s) in README
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:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

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Fork of YuLab-SMU/clusterProfiler
Created over 5 years ago · Last pushed over 5 years ago

https://github.com/animesh/clusterProfiler/blob/master/ 

# clusterProfiler



[![Project Status: Active - The project has reached a stable, usable
state and is being actively
developed.](http://www.repostatus.org/badges/latest/active.svg)](http://www.repostatus.org/#active)
[![](https://img.shields.io/badge/release%20version-3.14.0-green.svg)](https://www.bioconductor.org/packages/clusterProfiler)
[![](https://img.shields.io/badge/devel%20version-3.15.1-green.svg)](https://github.com/guangchuangyu/clusterProfiler)
[![Bioc](http://www.bioconductor.org/shields/years-in-bioc/clusterProfiler.svg)](https://www.bioconductor.org/packages/devel/bioc/html/clusterProfiler.html#since)

[![platform](http://www.bioconductor.org/shields/availability/devel/clusterProfiler.svg)](https://www.bioconductor.org/packages/devel/bioc/html/clusterProfiler.html#archives)
[![Build
Status](http://www.bioconductor.org/shields/build/devel/bioc/clusterProfiler.svg)](https://bioconductor.org/checkResults/devel/bioc-LATEST/clusterProfiler/)
[![Linux/Mac Travis Build
Status](https://img.shields.io/travis/GuangchuangYu/clusterProfiler/master.svg?label=Mac%20OSX%20%26%20Linux)](https://travis-ci.org/GuangchuangYu/clusterProfiler)
[![AppVeyor Build
Status](https://img.shields.io/appveyor/ci/Guangchuangyu/clusterProfiler/master.svg?label=Windows)](https://ci.appveyor.com/project/GuangchuangYu/clusterProfiler)
[![codecov](https://codecov.io/gh/GuangchuangYu/clusterProfiler/branch/master/graph/badge.svg)](https://codecov.io/gh/GuangchuangYu/clusterProfiler/)



This package implements methods to analyze and visualize functional
profiles of genomic coordinates (supported by
[ChIPseeker](http://www.bioconductor.org/packages/ChIPseeker)), gene and
gene clusters.

For details, please visit
.

## :writing\_hand: Authors

Guangchuang YU

School of Basic Medical Sciences, Southern Medical University



[![Twitter](https://img.shields.io/twitter/url/http/shields.io.svg?style=social&logo=twitter)](https://twitter.com/intent/tweet?hashtags=clusterProfiler&url=http://online.liebertpub.com/doi/abs/10.1089/omi.2011.0118&screen_name=guangchuangyu)
[![saythanks](https://img.shields.io/badge/say-thanks-ff69b4.svg)](https://saythanks.io/to/GuangchuangYu)
[![](https://img.shields.io/badge/follow%20me%20on-WeChat-green.svg)](https://guangchuangyu.github.io/blog_images/biobabble.jpg)

-----

Please cite the following article when using `clusterProfiler`:

***Yu G***, Wang L, Han Y and He Q\*. clusterProfiler: an R
package for comparing biological themes among gene clusters. OMICS: A
Journal of Integrative Biology. 2012, 16(5):284-287.

[![](https://img.shields.io/badge/1st%20most%20cited%20paper-in%20OMICS-green.svg)](http://online.liebertpub.com/action/showMostCitedArticles?journalCode=omi)
![](https://img.shields.io/badge/ESI-Highly%20Cited%20Paper-green.svg)
[![](https://img.shields.io/badge/doi-10.1089/omi.2011.0118-green.svg)](https://doi.org/10.1089/omi.2011.0118)

Owner

  • Name: Ani
  • Login: animesh
  • Kind: user
  • Location: Norway
  • Company: Norwegian University of Science and Technology

A medical graduate from Delhi University with post-graduation in bioinformatics from Jawaharlal Nehru University, India.

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