Science Score: 67.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Academic email domains
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (8.3%) to scientific vocabulary
Repository
Nek5000 ABL user code
Basic Info
- Host: GitHub
- Owner: exabl
- License: bsd-3-clause
- Language: Fortran
- Default Branch: master
- Homepage: https://exabl.github.io/snek5000-abl
- Size: 13.4 MB
Statistics
- Stars: 2
- Watchers: 0
- Forks: 0
- Open Issues: 14
- Releases: 1
Metadata Files
README.md
snek5000-abl
Simulations of turbulent atmospheric boundary layer using snek5000.
Documentation: https://exabl.github.io/snek5000-abl/
[!WARNING] :::{warning} The code is a prototype and far from ready for production runs. Some parts of the code are well validated and some parts require rigorous testing and could contain bugs. Use it with caution. To know the detailed status of the code, checkout the roadmap. :::
Quick start
Install using Python 3.8+ as follows:
git clone --recursive https://github.com/exabl/snek5000-abl.git
cd snek5000-abl
pip install -e .
Activate necessary environment variables
source activate.sh
Use the command line tool to launch / set / inspect the simulation parameters
abl --help
Tests
```sh pip install -e '.[tests]'
Run simple tests: including compilation
pytest
Run slow tests: launches simulation
pytest --runslow ```
Owner
- Name: ExABL
- Login: exabl
- Kind: organization
- Website: https://e-science.se/people-and-research/projects/exabl/
- Repositories: 1
- Profile: https://github.com/exabl
Citation (CITATION.cff)
cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: Mohanan
given-names: Ashwin Vishnu
orcid: https://orcid.org/0000-0002-2979-6327
- family-names: Brethouwer
given-names: Geert
orcid: https://orcid.org/0000-0002-9819-2906
- family-names: Schlatter
given-names: Philipp
orcid: https://orcid.org/0000-0001-9627-5903
title: "exabl/snek5000-abl"
doi: 10.5281/zenodo.13208690
version: 0.6.0b0
date-released: 2024-08-04
url: https://github.com/exabl/snek5000-abl
GitHub Events
Total
Last Year
Dependencies
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/setup-python v1 composite
- peaceiris/actions-gh-pages v3 composite
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- ansiwrap ==0.8.4
- appdirs ==1.4.4
- astunparse ==1.6.3
- async-generator ==1.10
- autopep8 ==1.5.3
- awkupy ==0.1.0b0
- backcall ==0.1.0
- beniget ==0.2.1
- black ==19.10b0
- bullet ==2.1.0
- cached-property ==1.5.1
- cfgv ==3.1.0
- click ==7.1.2
- colorama ==0.4.3
- colorlog ==4.1.0
- configargparse ==1.2.3
- dask ==2.19.0
- datrie ==0.8.2
- distlib ==0.3.0
- docutils ==0.16
- filelock ==3.0.12
- fluiddyn ==0.3.2
- fluidfft ==0.3.1
- fluidsim ==0.3.2
- fortran-language-server ==1.11.1
- gast ==0.3.3
- gitdb ==4.0.5
- gitpython ==3.1.3
- greenlet ==0.4.15
- h5netcdf ==0.8.0
- h5py ==2.10.0
- identify ==1.4.18
- importlib-metadata ==1.6.0
- inflection ==0.4.0
- ipykernel ==5.3.0
- ipython ==7.15.0
- ipython-genutils ==0.2.0
- jedi ==0.17.0
- json5 ==0.9.5
- jupyter-client ==6.1.3
- jupyter-console ==6.1.0
- jupyterlab ==2.1.4
- jupyterlab-git ==0.20.0
- jupyterlab-server ==1.1.5
- msgpack ==1.0.0
- nbclient ==0.4.0
- nbdime ==2.0.0
- nbformat ==5.0.6
- nest-asyncio ==1.3.3
- nodeenv ==1.4.0
- pandas ==1.0.4
- papermill ==2.1.1
- pathspec ==0.8.0
- pluggy ==0.13.1
- pre-commit ==2.4.0
- psutil ==5.7.0
- ptyprocess ==0.6.0
- pycodestyle ==2.6.0
- pyfftw ==0.12.0
- pynvim ==0.4.1
- python-jsonrpc-server ==0.3.4
- python-language-server ==0.33.0
- pytz ==2020.1
- pyyaml ==5.3.1
- pyzmq ==19.0.1
- ratelimiter ==1.2.0.post0
- regex ==2020.6.8
- send2trash ==1.5.0
- setuptools-scm ==4.1.2
- smmap ==3.0.4
- snakemake ==5.19.0
- tenacity ==6.2.0
- terminado ==0.8.3
- textwrap3 ==0.9.2
- toml ==0.10.1
- toolz ==0.10.0
- toposort ==1.5
- transonic ==0.4.2
- typed-ast ==1.4.1
- ujson ==1.35
- virtualenv ==20.0.21
- wcwidth ==0.2.2
- webencodings ==0.5.1
- wrapt ==1.12.1
- xarray ==0.15.1
- Babel ==2.9.1 development
- Pygments ==2.10.0 development
- SecretStorage ==3.3.1 development
- Sphinx ==4.3.1 development
- Unidecode ==1.3.2 development
- alabaster ==0.7.12 development
- argcomplete ==1.12.3 development
- backcall ==0.2.0 development
- backports.entry-points-selectable ==1.1.1 development
- beautifulsoup4 ==4.10.0 development
- bleach ==4.1.0 development
- breathe ==4.31.0 development
- build ==0.7.0 development
- cffi ==1.15.0 development
- cfgv ==3.3.1 development
- colorama ==0.4.4 development
- colorlog ==6.6.0 development
- commonmark ==0.9.1 development
- cryptography ==36.0.0 development
- css-html-js-minify ==2.5.5 development
- debugpy ==1.5.1 development
- decorator ==5.1.0 development
- distlib ==0.3.3 development
- execnet ==1.9.0 development
- fancycompleter ==0.9.1 development
- flake8 ==4.0.1 development
- fortran-language-server ==1.12.0 development
- identify ==2.4.0 development
- imagesize ==1.3.0 development
- importlib-metadata ==4.8.2 development
- iniconfig ==1.1.1 development
- ipykernel ==6.6.0 development
- ipython ==7.30.0 development
- jedi ==0.18.1 development
- jeepney ==0.7.1 development
- jupyter-client ==7.1.0 development
- keyring ==23.4.0 development
- lxml ==4.6.4 development
- matplotlib-inline ==0.1.3 development
- mccabe ==0.6.1 development
- mpmath ==1.2.1 development
- nest-asyncio ==1.5.2 development
- nodeenv ==1.6.0 development
- nox ==2021.10.1 development
- parso ==0.8.3 development
- pdbpp ==0.10.3 development
- pep517 ==0.12.0 development
- pexpect ==4.8.0 development
- pickleshare ==0.7.5 development
- pkginfo ==1.8.1 development
- platformdirs ==2.4.0 development
- pluggy ==1.0.0 development
- pre-commit ==2.16.0 development
- prompt-toolkit ==3.0.23 development
- ptyprocess ==0.7.0 development
- py ==1.11.0 development
- pycodestyle ==2.8.0 development
- pycparser ==2.21 development
- pyflakes ==2.4.0 development
- pyrepl ==0.9.0 development
- pytest ==6.2.5 development
- pytest-forked ==1.3.0 development
- pytest-ordering ==0.6 development
- pytest-xdist ==2.4.0 development
- python-lsp-jsonrpc ==1.0.0 development
- python-lsp-server ==1.3.2 development
- python-slugify ==5.0.2 development
- pyzmq ==22.3.0 development
- readme-renderer ==30.0 development
- recommonmark ==0.7.1 development
- requests-toolbelt ==0.9.1 development
- rfc3986 ==1.5.0 development
- rich ==10.15.1 development
- snowballstemmer ==2.2.0 development
- soupsieve ==2.3.1 development
- sphinx-material ==0.0.35 development
- sphinxcontrib-applehelp ==1.0.2 development
- sphinxcontrib-devhelp ==1.0.2 development
- sphinxcontrib-htmlhelp ==2.0.0 development
- sphinxcontrib-jsmath ==1.0.1 development
- sphinxcontrib-qthelp ==1.0.3 development
- sphinxcontrib-serializinghtml ==1.1.5 development
- sympy ==1.9 development
- text-unidecode ==1.3 development
- toml ==0.10.2 development
- tornado ==6.1 development
- tqdm ==4.62.3 development
- twine ==3.7.0 development
- ujson ==4.3.0 development
- virtualenv ==20.10.0 development
- wcwidth ==0.2.5 development
- webencodings ==0.5.1 development
- wmctrl ==0.4 development
- ConfigArgParse ==1.5.3
- GitPython ==3.1.24
- Jinja2 ==3.0.3
- MarkupSafe ==2.0.1
- Pillow ==8.4.0
- PuLP ==2.5.1
- PyYAML ==6.0
- QtPy ==1.11.2
- appdirs ==1.4.4
- attrs ==21.2.0
- certifi ==2021.10.8
- charset-normalizer ==2.0.8
- click ==8.0.3
- connection-pool ==0.0.3
- cycler ==0.11.0
- datrie ==0.8.2
- distro ==1.6.0
- docutils ==0.17.1
- entrypoints ==0.3
- filelock ==3.4.0
- fluiddyn ==0.4.0
- fluidsim-core ==0.5.1
- fonttools ==4.28.2
- gitdb ==4.0.9
- h5netcdf ==0.11.0
- h5py ==3.6.0
- idna ==3.3
- importlib-resources ==5.4.0
- inflection ==0.5.1
- ipython-genutils ==0.2.0
- jsonschema ==4.2.1
- jupyter-core ==4.9.1
- kiwisolver ==1.3.2
- matplotlib ==3.5.0
- nbformat ==5.1.3
- numpy ==1.21.4
- packaging ==21.3
- pandas ==1.3.4
- psutil ==5.8.0
- pymech ==1.4.1
- pyparsing ==3.0.6
- pyrsistent ==0.18.0
- python-dateutil ==2.8.2
- pytz ==2021.3
- ratelimiter ==1.2.0.post0
- requests ==2.26.0
- setuptools-scm ==6.3.2
- six ==1.16.0
- smart-open ==5.2.1
- smmap ==5.0.0
- snakemake ==6.12.1
- snek5000 >0.7.0b0
- stopit ==1.1.2
- tabulate ==0.8.9
- tomli ==1.2.2
- toposort ==1.7
- traitlets ==5.1.1
- typing_extensions ==4.0.1
- urllib3 ==1.26.7
- wrapt ==1.13.3
- xarray ==0.19.0
- zipp ==3.6.0
- zstandard ==0.16.0