help
The Help Framework for Essential Gene detection and Prediction
Science Score: 67.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: biorxiv.org, zenodo.org -
○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (8.0%) to scientific vocabulary
Repository
The Help Framework for Essential Gene detection and Prediction
Basic Info
Statistics
- Stars: 1
- Watchers: 1
- Forks: 1
- Open Issues: 1
- Releases: 3
Metadata Files
README.md
HELP
The Help Framework for Essetial Gene detection and Prediction
Documentation
The HELP software documentation is available at: https://giordamaug.github.io/myprojects/HELP/
Credits
The HELP Framework was developed by the Computational Data Science group of High Performance Computing and Networking Institute of National Research Council of Italy (ICAR-CNR).
Cite
If you use want to reference this software, please use the DOI: doi/10.5281/zenodo.10964743
If you want to cite the work in which this software is first used and described, please cite the following article:
@article {Granata2024.04.16.589691,
author = {Ilaria Granata and Lucia Maddalena and Mario Manzo and Mario Rosario Guarracino and Maurizio Giordano},
title = {HELP: A computational framework for labelling and predicting human context-specific essential genes},
elocation-id = {2024.04.16.589691},
year = {2024},
doi = {10.1101/2024.04.16.589691},
publisher = {Cold Spring Harbor Laboratory},
URL = {https://www.biorxiv.org/content/early/2024/04/20/2024.04.16.589691},
eprint = {https://www.biorxiv.org/content/early/2024/04/20/2024.04.16.589691.full.pdf},
journal = {bioRxiv}
}
Owner
- Name: Maurizio Giordano
- Login: giordamaug
- Kind: user
- Location: Naples
- Company: ICAR - CNR
- Website: https://www.linkedin.com/in/giordanomaurizio
- Repositories: 3
- Profile: https://github.com/giordamaug
Maurizio is a research scientist of Italian CNR. He likes programming since he was a student in Physics. He likes scifi books/movies, boardgames & painting.
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!
cff-version: 1.2.0
title: >-
giordamaug/HELP: Human Gene Essentiality Labelling &
Prediction
message: 'If you use this software, please cite it as below.'
type: software
authors:
- family-names: Maurizio
given-names: Giordano
orcid: 'https://orcid.org/0000-0001-9917-7591'
- family-names: Ilaria
given-names: Granata
orcid: 'https://orcid.org/0000-0002-3450-4667'
- family-names: Lucia
given-names: Maddalena
orcid: 'https://orcid.org/0000-0002-0567-4624'
repository-code: 'https://github.com/giordamaug/HELP'
abstract: >-
HELP (Human Gene Essentiality Labelling & Pediction) is a
computational framework for labelling and predicting
essential genes in different human tissue and disease
contexts. HELPpy is the software implementing the HELP
framework in Python.
license: GPL-3.0
version: v2.0
date-released: '2024-04-12'
GitHub Events
Total
- Push event: 9
Last Year
- Push event: 9
Dependencies
- ipywidgets *
- matplotlib *
- numpy *
- pandas *
- scikit-learn *
- scipy *
- supervenn *
- tqdm *
- typing *