https://github.com/aqlaboratory/hsm-web
Website associated with the "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 5 DOI reference(s) in README -
○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.5%) to scientific vocabulary
Repository
Website associated with the "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
Basic Info
- Host: GitHub
- Owner: aqlaboratory
- License: mit
- Language: HTML
- Default Branch: master
- Homepage: https://proteinpeptide.io
- Size: 553 KB
Statistics
- Stars: 7
- Watchers: 3
- Forks: 3
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
hsm-web - Biophysical prediction of protein-peptide interactions and signaling networks using machine learning.
This repository contains the code associated with the website for Biophysical prediction of protein-peptide interactions and signaling networks using machine learning.. The website is located at proteinpeptide.io. The website depends on downloading pre-processed data from figshare and placing the directories into assets.
Reference
Please reference the associated publication:
Cunningham, J.M., Koytiger, G., Sorger, P.K., & AlQuraishi, M. "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning." Nature Methods (2020). doi:10.1038/s41592-019-0687-1.
See also
- Paper code:aqlaboratory/hsm
Credits
- Protein Viewer: 3Dmol.js
- Network Viewer: D3.js
- Styling / Layout: Bootstrap stack
Funding
This work was supported by the following sources:
| Funder | Grant number | | ---------- | ---------------- | | NIH | U54-CA225088 | | NIH | P50-GM107618 | | DARPA / DOD | W911NF-14-1-0397 |
License
This repository is released under an MIT License
Owner
- Name: AQ Laboratory
- Login: aqlaboratory
- Kind: organization
- Email: m.alquraishi@columbia.edu
- Location: Columbia University
- Website: aqlab.io
- Twitter: MoAlQuraishi
- Repositories: 17
- Profile: https://github.com/aqlaboratory
GitHub Events
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Last Year
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Last synced: over 1 year ago
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- Total issues: 0
- Total pull requests: 0
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- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
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- Bot pull requests: 0
Past Year
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- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
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- Average comments per issue: 0
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