https://github.com/aramis-lab/clinicadl_handbook
Tutorial to use (new version of) clinicadl (>1.0.3)
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.3%) to scientific vocabulary
Keywords
Repository
Tutorial to use (new version of) clinicadl (>1.0.3)
Basic Info
- Host: GitHub
- Owner: aramis-lab
- License: cc0-1.0
- Language: Jupyter Notebook
- Default Branch: main
- Homepage: https://aramislab.paris.inria.fr/clinicadl/tuto/2023/html/
- Size: 5.89 MB
Statistics
- Stars: 2
- Watchers: 3
- Forks: 7
- Open Issues: 6
- Releases: 0
Topics
Metadata Files
README.md
Notebooks for presentation of ClinicaDL
Plan
Update current clinicaDL jupyter-book.
Where to begin
Notebooks are generated from python files stored in the src folder.
Automatic generated notebooks are added into the notebooks folder.
To start contributing, start a brand new Conda environment with this command:
make env.conda
Then activate the environment and install depedencies with Poetry:
conda activate ./env
make env.dev
Once installed dependencies. if you want to convert from python files to
notebooks just type make build.notebooks.
To produce the jupyter-book type make build.book.
Remember to activate the conda environment before running these commands.
Owner
- Name: ARAMIS Lab
- Login: aramis-lab
- Kind: organization
- Location: Paris, France
- Website: www.aramislab.fr
- Twitter: AramisLabParis
- Repositories: 21
- Profile: https://github.com/aramis-lab
The Aramis Lab is a joint research team between CNRS, Inria, Inserm and Sorbonne University and belongs to the Paris Brain Institute (ICM).
GitHub Events
Total
- Watch event: 2
- Fork event: 1
Last Year
- Watch event: 2
- Fork event: 1
Issues and Pull Requests
Last synced: 6 months ago
Dependencies
- registry.gitlab.inria.fr/sed-paris/mpp/containers/mpp-python-minimal latest-gpu build
- 266 dependencies
- jupyterlab ^3.5.3 develop
- jupytext ^1.14.4 develop
- markupsafe ^2.1.2 develop
- sphinx-click ^4.4.0 develop
- sphinx-tabs ^3.4.0 develop
- sphinxcontrib-bibtex ^2.5.0 develop
- clinicadl ^1.2.0
- jupyter-book ^0.13.1
- python >=3.8,<3.11
- torchsummary ^1.4.0
- python 3.10.*