https://github.com/aramis-lab/now-2023
Repository for the 2023 NeuroScience Open Workshop
Science Score: 26.0%
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○CITATION.cff file
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✓codemeta.json file
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✓.zenodo.json file
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○DOI references
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (10.7%) to scientific vocabulary
Repository
Repository for the 2023 NeuroScience Open Workshop
Basic Info
- Host: GitHub
- Owner: aramis-lab
- License: mit
- Language: Jupyter Notebook
- Default Branch: main
- Homepage: https://aramislab.paris.inria.fr/workshops/NOW/
- Size: 4.12 MB
Statistics
- Stars: 1
- Watchers: 5
- Forks: 1
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
NOW-2023
Repository for the 2023 NeuroScience Open Workshop.
The online version, published as a Jupyter book can be browsed here.
The notebooks rely on the now-2023 library.
Quick start
If you want to follow the tutorial online, there is nothing to do, just go the jupyter book and run the interactive notebooks on Collab.
If you want to follow on your local machine, we strongly encourage you to build a virtual environment (for example with conda). You can then install the requirements:
bash
$ conda env create -f environment.yml
$ conda activate now
$ pip install -r requirements.txt
$ pip install -r ./jupyter-book/requirements.txt
Schedule
| Morning | Afternoon | Section | | ------- | --------- | ------- | | 09:00-09:30 | 13:30-14:00 | Introduction and setup | | 09:30-09:45 | 14:00-14:15 | Introduction to Git | | 09:45-10:30 | 14:15-15:00 | Version your code with Git | | 10:30-10:45 | 15:00-15:15 | Break | | 10:45-11:00 | 15:15-15:30 | Introduction to DVC | | 11:00-11:30 | 15:30-16:00 | Version code and data with DVC | | 11:30-12:00 | 16:00-16:30 | Version your experiments as data pipelines |
Contributing
Build all the notebooks
Once your changes are done in the scripts (the src files) run at the root folder:
make
This command will recreate automatically the notebooks and clean the outputs.
Build the jupyter-book
You need to install the requirements:
$ pip install -r jupyter-book/requirements.txt
Then:
$ cd jupyter-book
$ make
The HTML files are then in jupyter-book/_build/html/.
External ressources
Owner
- Name: ARAMIS Lab
- Login: aramis-lab
- Kind: organization
- Location: Paris, France
- Website: www.aramislab.fr
- Twitter: AramisLabParis
- Repositories: 21
- Profile: https://github.com/aramis-lab
The Aramis Lab is a joint research team between CNRS, Inria, Inserm and Sorbonne University and belongs to the Paris Brain Institute (ICM).
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