adrt
adrt: approximate discrete Radon transform for Python - Published in JOSS (2023)
Science Score: 100.0%
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✓CITATION.cff file
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✓codemeta.json file
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✓.zenodo.json file
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✓DOI references
Found 13 DOI reference(s) in README and JOSS metadata -
✓Academic publication links
Links to: joss.theoj.org -
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5 of 6 committers (83.3%) from academic institutions -
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✓JOSS paper metadata
Published in Journal of Open Source Software
Keywords from Contributors
Scientific Fields
Repository
Fast approximate discrete Radon transform for NumPy arrays
Basic Info
- Host: GitHub
- Owner: karlotness
- License: bsd-3-clause
- Language: Python
- Default Branch: master
- Homepage: https://adrt.readthedocs.io
- Size: 1.05 MB
Statistics
- Stars: 8
- Watchers: 3
- Forks: 1
- Open Issues: 0
- Releases: 4
Metadata Files
README.md
Approximate Discrete Radon Transform
Fast approximate discrete Radon transform for NumPy arrays.
- Documentation: https://adrt.readthedocs.io/en/latest/
- Source Code: https://github.com/karlotness/adrt
- Bug Reports: https://github.com/karlotness/adrt/issues
This library provides an implementation of an approximate discrete Radon transform (ADRT) and related routines as a Python module operating on NumPy arrays. Implemented routines include: the forward ADRT, a back-projection operation, and several inverse transforms. The package documentation contains usage examples, and sample applications.
Installation
Install from PyPI using pip:
console
$ python -m pip install adrt
or from conda-forge:
console
$ conda install -c conda-forge adrt
For further details on installation or building from source, consult the documentation.
Citation
If you use this software in your research, please cite our associated JOSS paper.
BibTeX
@article{adrt,
title={adrt: approximate discrete {R}adon transform for {P}ython},
author={Karl Otness and Donsub Rim},
journal={Journal of Open Source Software},
publisher={The Open Journal},
year=2023,
doi={10.21105/joss.05083},
url={https://doi.org/10.21105/joss.05083},
volume=8,
number=83,
pages=5083,
}
References
This implementation is based on descriptions in several publications: - Martin L. Brady, A Fast Discrete Approximation Algorithm for the Radon Transform Related Databases, SIAM Journal on Computing, 27. - William H. Press, Discrete Radon transform has an exact, fast inverse and generalizes to operations other than sums along lines, Proceedings of the National Academy of Sciences, 103. - Donsub Rim, Exact and fast inversion of the approximate discrete Radon transform from partial data, Applied Mathematics Letters, 102.
License
This software is distributed under the 3-clause BSD license. See LICENSE.txt for the license text.
We also make available several pre-built binary copies of this software. The binary build for Windows includes additional license terms for runtime code included as part of the software. Review the LICENSE.txt file in the binary build package for more information.
Owner
- Name: Karl Otness
- Login: karlotness
- Kind: user
- Location: New York, NY
- Company: NYU
- Website: https://www.karlotness.com/
- Repositories: 6
- Profile: https://github.com/karlotness
PhD student at NYU, researching applications of ML to simulations and climate with researchers at @m2lines
JOSS Publication
adrt: approximate discrete Radon transform for Python
Authors
New York University, New York, NY, USA
Washington University in St. Louis, St. Louis, MO, USA
Editor
Patrick Diehl
Tags
numerical algorithms fast transforms image processing Radon transform approximate discrete Radon transformCitation (CITATION.cff)
cff-version: 1.2.0
message: "If you use this software in your work, please cite our JOSS paper."
authors:
- family-names: "Otness"
given-names: "Karl"
orcid: "https://orcid.org/0000-0001-8534-2648"
- family-names: "Rim"
given-names: "Donsub"
orcid: "https://orcid.org/0000-0002-6721-2070"
title: "adrt: approximate discrete Radon transform for Python"
doi: "10.5281/zenodo.7738253"
url: "https://github.com/karlotness/adrt"
preferred-citation:
type: article
authors:
- family-names: "Otness"
given-names: "Karl"
orcid: "https://orcid.org/0000-0001-8534-2648"
- family-names: "Rim"
given-names: "Donsub"
orcid: "https://orcid.org/0000-0002-6721-2070"
title: "adrt: approximate discrete Radon transform for Python"
doi: "10.21105/joss.05083"
url: "https://doi.org/10.21105/joss.05083"
publisher:
name: "The Open Journal"
journal: "Journal of Open Source Software"
volume: 8
number: 83
pages: 5083
year: 2023
GitHub Events
Total
- Release event: 1
- Watch event: 2
- Delete event: 4
- Push event: 9
- Pull request event: 3
- Create event: 5
Last Year
- Release event: 1
- Watch event: 2
- Delete event: 4
- Push event: 9
- Pull request event: 3
- Create event: 5
Committers
Last synced: 5 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Karl Otness | k****s@n****u | 1,237 |
| dsrim | r****m@w****u | 112 |
| dependabot[bot] | 4****] | 3 |
| Daniel S. Katz | d****z@i****g | 2 |
| dsrim | d****5@c****u | 1 |
| Don Rim | d****3@n****u | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 4 months ago
All Time
- Total issues: 4
- Total pull requests: 5
- Average time to close issues: 7 days
- Average time to close pull requests: about 16 hours
- Total issue authors: 2
- Total pull request authors: 2
- Average comments per issue: 3.0
- Average comments per pull request: 0.4
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 4
Past Year
- Issues: 0
- Pull requests: 1
- Average time to close issues: N/A
- Average time to close pull requests: about 16 hours
- Issue authors: 0
- Pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 0.0
- Merged pull requests: 1
- Bot issues: 0
- Bot pull requests: 1
Top Authors
Issue Authors
- zhangjy-ge (2)
- fruzsinaagocs (2)
Pull Request Authors
- dependabot[bot] (6)
- danielskatz (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- pypi 372 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 5
- Total maintainers: 2
pypi.org: adrt
Fast approximate discrete Radon transform for NumPy arrays
- Homepage: https://github.com/karlotness/adrt
- Documentation: https://adrt.readthedocs.io
- License: bsd-3-clause
-
Latest release: 1.2.0
published 7 months ago
Rankings
Maintainers (2)
Dependencies
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- actions/download-artifact v3 composite
- actions/setup-python v4 composite
- actions/upload-artifact v3 composite
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- actions/setup-python v4 composite
- matplotlib >=3.6.1,<4
- numpy *
- packaging *
- scikit-image *
- scipy *
- sphinx >=5.3.0,<6
- sphinx-rtd-theme >=1.1.1,<2
- requests *
- numpy >=1.22,<2
- more-itertools * test
- pytest >=6 test
- scipy * test