template

template for pathology atlas repositories

https://github.com/pathologyatlas/template

Science Score: 67.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 1 DOI reference(s) in README
  • Academic publication links
    Links to: zenodo.org
  • Academic email domains
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (6.9%) to scientific vocabulary

Keywords

atlas histopathology pathology
Last synced: 9 months ago · JSON representation ·

Repository

template for pathology atlas repositories

Basic Info
Statistics
  • Stars: 1
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Topics
atlas histopathology pathology
Created over 4 years ago · Last pushed almost 2 years ago
Metadata Files
Readme License Citation

README.md

template

template for pathology atlas repositories

{{< include ./subchapters/template.qmd >}}

see [make-html-WSI](https://github.com/pathologyatlas/make-html-WSI) for more information and [TODO](https://github.com/pathologyatlas/TODO) to add cases

``` update html file heading:

TemplateEN TemplateTR

```

```zsh

vips dzsave HE.svs HE

```

``` update html file to match .dzi file

```

consider using git_push.sh script to upload files to github, since the number of generated files is huge

after upload complete, do not forget to activate github pages for the new repository

TemplateEN TemplateTR

https://images.patolojiatlasi.com/template/

https://images.patolojiatlasi.com/template/HE1.html

TemplateTR

Tam Ekran Görmek İçin Resmi Tıklayın

Tam Ekran Görmek İçin Resmi Tıklayın

TemplateEN

Click for Full Screen WSI

Click for Full Screen WSI

Mikroskopik görüntüleri inceleyin:

See Microscopy with viewer:

https://images.patolojiatlasi.com/template/

https://images.patolojiatlasi.com/template/HE2.html

TemplateTR

Tam Ekran Görmek İçin Resmi Tıklayın

Tam Ekran Görmek İçin Resmi Tıklayın

TemplateEN

Click for Full Screen WSI

Click for Full Screen WSI

Mikroskopik görüntüleri inceleyin:

See Microscopy with viewer:

yaml - stainname: template-HE1 reponame: template titleTR: TemplateTR titleEN: TemplateEN organTR: '' organEN: '' speciality: '' type: published author: - Serdar Balci - Memorial Patoloji date: 2024-03-09 url: https://images.patolojiatlasi.com/template/HE1.html note: '' categoriesTR: - '' - '' - '' - patoloji - atlas - histopatoloji - whole slide image - sanal mikroskop categoriesEN: - '' - '' - '' - pathology - atlas - histopathology - whole slide image - virtual microscopy - virtual microscope screenshot: https://www.patolojiatlasi.com/screenshots/thumbnail_template-HE1.png github: https:///github.com/pathologyatlas/template githubpage: https://pathologyatlas.github.io/template youtube: https://www.youtube.com/watch?v=youtube_link

yaml - stainname: template-HE2 reponame: template titleTR: TemplateTR titleEN: TemplateEN organTR: '' organEN: '' speciality: '' type: published author: - Serdar Balci - Memorial Patoloji date: 2024-03-09 url: https://images.patolojiatlasi.com/template/HE2.html note: '' categoriesTR: - '' - '' - '' - patoloji - atlas - histopatoloji - whole slide image - sanal mikroskop categoriesEN: - '' - '' - '' - pathology - atlas - histopathology - whole slide image - virtual microscopy - virtual microscope screenshot: https://www.patolojiatlasi.com/screenshots/thumbnail_template-HE2.png github: https:///github.com/pathologyatlas/template githubpage: https://pathologyatlas.github.io/template youtube: https://www.youtube.com/watch?v=youtube_link


  • Sosyal medyadan derlenen görüntülerden oluşan patoloji notları için tıklayın.

  • For social media based pathology notes click here.

Get it on Apple Books

| Atıf için (Citation) | |------------------------------------------------------------------------| | | | Open Science Framework DOI: 10.17605/OSF.IO/6W5K8 | | | | | | Twitter | | Twitter |

Owner

  • Name: Pathology Atlas
  • Login: pathologyatlas
  • Kind: organization
  • Email: info@patolojinotlari.com
  • Location: Turkey

Pathology Atlas and Notes for Medical Students: See and Learn

Citation (CITATION.cff)

# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!

cff-version: 1.2.0
title: Patoloji Atlasi
message: >-
  Patoloji Atlası:
  Tıp Fakültesi ve Sağlık Bilimleri Öğrencileri İçin
  Patoloji Laboratuvar Notları.  
  Patoloji Atlas. 
  Patoloji Notu. 
  Sanal Mikroskop.  
  Online Patoloji Atlası.  
  Patoloji Ders Notları ve Patoloji Atlası
  Memorial Patoloji arşivinden derlenen vakalardan ve
  diğer kurumlardan katkı yapan meslektaşlarımızın kolleksiyonlarından oluşmaktadır.
  Atlas of Pathology with Whole Slide Images. 
  Histopathology Atlas and Notes for Medical Students. 
  Atlas of Histopathology. 
  Notes for Pathology. 
  Virtual Microscope. 
  Virtual Microscopy. 
  Online Pathology Atlas. 
  Pathology Lecture Notes and Histopathology Atlas is being prepared from
  Memorial Pathology Archive and collaborators from other institutions.
type: software
doi: 10.5281/zenodo.6382734
url: https://www.patolojiatlasi.com/
authors:
  - given-names: Serdar
    family-names: Balci
    email: serdarbalci@serdarbalci.com
    orcid: 'https://orcid.org/0000-0002-7852-3851'
    affiliation: Memorial Hospital Group Pathology Department

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