Recent Releases of mass-tools
mass-tools - v7.49.0
7.49.0 (2025-04-03)
Features
- JavaScript
Published by cheminfo-bot 11 months ago
mass-tools - v7.48.3
7.48.3 (2025-03-22)
Bug Fixes
- mf-parser: getNumberOfIsotopologues always returns a number. 0 if no stable isotopoe of no MF (ece391a)
- mf-parser: mf.getInfo always returns the nbIsotopologues property (032b1da)
- mf-parser: rename types PartInfo -> MFInfo, PartInfoWithParts -> MFInfoWithParts (3388b75)
- mf-parser: toParts({expand:false}) does not have side effects anymore (dec8cf9)
- JavaScript
Published by cheminfo-bot 12 months ago
mass-tools - v7.48.2
7.48.2 (2025-03-21)
Bug Fixes
- JavaScript
Published by cheminfo-bot 12 months ago
mass-tools - v7.48.0
7.48.0 (2025-03-20)
Features
- JavaScript
Published by cheminfo-bot 12 months ago
mass-tools - v7.47.1
7.47.1 (2025-03-17)
Bug Fixes
- JavaScript
Published by cheminfo-bot 12 months ago
mass-tools - v7.47.0
7.47.0 (2025-03-12)
Features
- mf-parser: remove useless surrounding parenthesis and 1 multiplier when displaying a MF (#262) (a9b9947)
- JavaScript
Published by cheminfo-bot 12 months ago
mass-tools - v7.46.0
7.46.0 (2025-03-10)
Features
Bug Fixes
- mf-parser: toDisplay deals correctly with simple charges (#261) (42d2b7a)
- mf-utilities: types returned by preprocessIonizations (#258) (629973d)
- only expose build code in packages (#255) (f295376)
- JavaScript
Published by cheminfo-bot 12 months ago
mass-tools - v7.45.0
7.45.0 (2024-12-18)
Features
- JavaScript
Published by cheminfo-bot about 1 year ago
mass-tools - v7.44.4
7.44.4 (2024-12-17)
Bug Fixes
- JavaScript
Published by cheminfo-bot about 1 year ago
mass-tools - v7.44.3
7.44.3 (2024-12-17)
Bug Fixes
- JavaScript
Published by cheminfo-bot about 1 year ago
mass-tools - v7.44.2
7.44.2 (2024-12-09)
Bug Fixes
- JavaScript
Published by cheminfo-bot about 1 year ago
mass-tools - v7.44.1
7.44.1 (2024-12-09)
Bug Fixes
- JavaScript
Published by cheminfo-bot about 1 year ago
mass-tools - v7.42.1
7.42.1 (2024-11-19)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.42.0
7.42.0 (2024-11-13)
Features
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.41.3
7.41.3 (2024-10-14)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.41.2
7.41.2 (2024-10-01)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.41.1
7.41.1 (2024-08-06)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.41.0
7.41.0 (2024-08-02)
Features
- add deltaNeutrons in isotopicDistribution when calculating the isotopic distribution (#208) (a543d38)
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.40.2
7.40.2 (2024-07-31)
Bug Fixes
- peptide: allow convertion of peptide sequences if only one letter (69338f2)
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.40.1
7.40.1 (2024-07-11)
Bug Fixes
- isotopic-distribution: deal correctly with isotopologues in case of non natural isotopic distribution (74684ba)
- mf-parser: getIsotopesInfo set correctly in the atom property the atom and not the isotope or enriched isotope (43f1046)
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.39.1
7.39.1 (2024-06-29)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 1 year ago
mass-tools - v7.38.0
7.38.0 (2024-06-05)
Features
- MassTools expostes mfFromAtomicRatio (ab787f1)
- JavaScript
Published by cheminfo-bot almost 2 years ago
mass-tools - v7.37.0
7.37.0 (2024-06-05)
Features
- mf-from-atomic-ratio: New package to find f from atomic ratio. Use in XPS for example. (06c1b3e)
- JavaScript
Published by cheminfo-bot almost 2 years ago
mass-tools - v7.36.1
7.36.1 (2024-05-17)
Bug Fixes
- JavaScript
Published by cheminfo-bot almost 2 years ago
mass-tools - v7.36.0
7.36.0 (2024-05-10)
Bug Fixes
- remove tests from build (7a6587e)
- JavaScript
Published by cheminfo-bot almost 2 years ago
mass-tools - v7.35.0
7.35.0 (2024-04-16)
Features
- JavaScript
Published by cheminfo-bot almost 2 years ago
mass-tools - v7.34.0
7.34.0 (2024-04-03)
Features
- mf-matcher: Add filter by minMW and maxMW for msemMatcher (c46e3b9)
- JavaScript
Published by cheminfo-bot almost 2 years ago
mass-tools - v7.33.5
7.33.5 (2024-03-16)
Bug Fixes
- JavaScript
Published by cheminfo-bot almost 2 years ago
mass-tools - v7.33.4
7.33.4 (2024-03-07)
Bug Fixes
- remove duplicates of ml-spectra-processing (040da0e)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.33.3
7.33.3 (2024-03-07)
Bug Fixes
- update ml-spectra-processing (4df865d)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.33.2
7.33.2 (2024-02-22)
Bug Fixes
- octochemdb: Cannot read property 'length' of undefined (f34993d)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.33.1
7.33.1 (2024-02-15)
Bug Fixes
- octochemdb: fix sorting if not data (3ee9fdd)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.33.0
7.33.0 (2024-01-30)
Features
- octochemdb: search activesOrNaturals with noStereoTautomerID (52ade5b)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.32.0
7.32.0 (2024-01-23)
Features
- allow to select technique in InSilicoSpectra search (964afbf)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.31.1
7.31.1 (2024-01-23)
Bug Fixes
- mass-fragmentation: array variables need to be plural (modes, ionizations) (672b9b0)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.31.0
7.31.0 (2023-12-13)
Features
- mass-fragmentation: use ionization and mode to get reactions (ca00605)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.30.1
7.30.1 (2023-12-12)
Bug Fixes
- octochemdb: sort in silice spectra search by similarity (328e707)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.30.0
7.30.0 (2023-12-12)
Features
- ms-spectrum: MSComparator returns a similarity object (acdfff5)
- JavaScript
Published by cheminfo-bot about 2 years ago
mass-tools - v7.29.0
7.29.0 (2023-12-06)
Features
- if relative mass display possible MF for selected peak (153a591)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.27.0
7.27.0 (2023-12-04)
Features
- ms-spectrum: Add new method getSimilarityByMasses (9409ffb)
- octochemdb: add searchInSilicoSpectra (cef6df1)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.26.0
7.26.0 (2023-11-28)
Features
- background color in svg is related to peak intensity (340e520)
- mass-fragmentation: improve db fragmentation reactions (1e3eaac)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.25.0
7.25.0 (2023-11-21)
Features
- mass-fragmentation: fragmentation without molfile (30fc7b9)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.24.0
7.24.0 (2023-11-15)
Features
- mass-fragmentation: improve reactions db (93ec153)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.23.0
7.23.0 (2023-11-13)
Features
- mass-fragmentation: improve reactions DB (09ce8db)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.22.0
7.22.0 (2023-11-01)
Features
- emdb: searchSimilarity add a factor that to match the experimental spectrum (183be3c)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.21.0
7.21.0 (2023-10-31)
Features
- isotopic-distribution: allow to have an auto zone for search similarity (d776120)
- isotopic-distribution: allow to specify a threshold to filter the peaks by height (b24f392)
- ms-spectrum: allow to specify threshold for peak picking (d398012)
Bug Fixes
- emdb: search similarity was not taking into account fwhm (8475459)
- isotopic-disribution: calculation of minY and maxY were inverted (38a1a9f)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.20.1
7.20.1 (2023-10-19)
Bug Fixes
- update dependencies and force old version of ml-matrix and ml-fcnnls (aaffb31)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.20.0
7.20.0 (2023-10-19)
Features
- mf-parser: add 'flatten' to mf object to expand all the ranges (1c461ea)
- mf-parser: add flatten method on MF (and remove processRange) (4e3c799)
- mf-utilities: processRange do not optimize if there is no ranges (79a8e88)
- mf-utilities: processRange has an option to optimize in case only unique MF is important (ab235a0)
- mfs-deconvolution: allow customMFs (613e4a0)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.19.1
7.19.1 (2023-10-16)
Bug Fixes
- mfs-deconvolution: buildCombined was buggy because mfs were reordered (8f148f6)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.19.0
7.19.0 (2023-10-16)
Features
- mfs-deconvolution: improve speed (e1ac88e)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.18.0
7.18.0 (2023-10-13)
Features
- mfs-deconvolution: return a function that allows to calculate filteredReconstructed (bfe5bd5)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.17.0
7.17.0 (2023-10-11)
Features
- mass-fragmentation: add molecules with same mass (e3cd1b7)
- mass-fragmentation: rename getMasses to groupByMZ (642c96e)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.16.0
7.16.0 (2023-10-10)
Features
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.15.0
7.15.0 (2023-10-10)
Features
- octochemdb: massSpectra queries returns the database (ace015d)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.13.1
7.13.1 (2023-10-06)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.13.0
7.13.0 (2023-10-05)
Features
- allow to findMFs with negative atoms (d4fa5c5)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.11.3
7.11.3 (2023-09-04)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.11.2
7.11.2 (2023-09-04)
Bug Fixes
- fetchJSON use local test files (55f222e)
- octochemdb: .only in tests (a089f13)
- octochemdb: fetch local files for activesOrNaturals (39d3a89)
- octochemdb: missing package msw for tests (00cf005)
- octochemdb: retry if fetch fail (8489705)
- use limit in tests to avoid timeout (b2c102e)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.11.1
7.11.1 (2023-08-25)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.11.0
7.11.0 (2023-08-25)
Features
- mass-fragmentation: limit reactions (ad5c902)
Bug Fixes
- mass-fragmentation: generate all combinations of ionization (efcc9dd)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.10.0
7.10.0 (2023-08-18)
Features
- custom ionization db for fragmentation (4672fe4)
- mass-fragmentation: export getDatabase (37873c2)
- mass-tools: give access to MassFragmentation in lactame (b9e9879)
- mfs-deconvolution: add difference and matchingScore (c00901a)
- ms-spectrum: allow to define threshold for peakPicking when creating spectrum (bbf0365)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.9.1
7.9.1 (2023-07-18)
Bug Fixes
- update dependencies (2beb667)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.9.0
7.9.0 (2023-07-18)
Features
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.8.2
7.8.2 (2023-07-17)
Bug Fixes
- octochemdb: taxonomy search (bf4eee0)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.8.1
7.8.1 (2023-07-11)
Bug Fixes
- searchTaxonomies filter instead of find (f3b01fe)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.8.0
7.8.0 (2023-07-11)
Features
- apply ionization to fixed level #126 (028d53e)
- full fragmentation of mdma (ec526fb)
- get count of lowest children (4f7b02a)
Bug Fixes
- add new field titles (cadee5d)
- get observed monoisotopic mass #123 (592ff9a)
- increased timeout (ceffed3)
- octochemdb: prevent double DB creating (a925180)
- removed useless imports (18e42e9)
- updated snapshot (aafde06)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.7.0
7.7.0 (2023-06-20)
Features
- octochemdb: add callback for in-memory search DB preparation (a89d628)
- octochemdb: taxonomyTree (31a58e6)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.6.0
7.6.0 (2023-06-19)
Features
- octochemdb: add compoundsFromMF and append title (679103d)
- octochemdb: add excludedCollections (1a5f907)
- octochemdb: add taxonomyComparator (bf0aa42)
- octochemdb: compoundsFromMF sorts results by title length (90778bc)
- taxonomyTree (2cd05f1)
Bug Fixes
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.5.0
7.5.0 (2023-06-13)
Features
- mfs-deconvolution: improve speed if no overlap between theoretical and experimental (ed6eb92)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.4.0
7.4.0 (2023-06-13)
Features
- mfs-deconvolution: add method reconstruct (c328711)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.3.0
7.3.0 (2023-06-12)
Features
- mass-tools: expose mfsDeconvolution (31e32c1)
- mfs-deconvolution: specify precision and sort result (c1b985e)
- octochemdb: add pubmedCompounds method (4ebadd2)
- search taxonomies (347da02)
- working version of mfsDeconvolutionq (e80c71c)
Bug Fixes
- octochemdb: correctly summarize taxonomies (ca91403)
- JavaScript
Published by cheminfo-bot over 2 years ago
mass-tools - v7.2.0
7.2.0 (2023-05-31)
Features
- db schema based on queryField and sort patents by nbCompounds (fa76d88)
- ms-spectrum: add spectrum info containing min / max values of the original spectrum (3dbf517)
- normalize activities (0f2a99a)
- octochemdb: expose activeOrNaturalSummarize (3be69fa)
- text search to summarize activeOrNatural entry (78a4112)
Bug Fixes
- JavaScript
Published by cheminfo-bot almost 3 years ago
mass-tools - v7.1.0
7.1.0 (2023-05-24)
Features
- octochemdb: sort by default activesOrNaturals by nbMassSpectra (cbcf4d2)
- JavaScript
Published by cheminfo-bot almost 3 years ago
mass-tools - v7.0.0
7.0.0 (2023-05-24)
⚠ BREAKING CHANGES
- move searchGNPS to OctoChemDB
- remove searchPubchem, searchActivesOrNaturals, searchAndGroupActivesOrNaturals
Features
- mf-parser: possibility to customize getInfo fieldNames for em (d4e422e)
- move searchGNPS to OctoChemDB (abff44a)
- octochemdb: add activeOrNaturalDetails (610f7b1)
- octochemdb: add activeOrNaturalSummarize (ca852b7)
- octochemdb: add activesOrNaturals and activesOrNaturalsByMF (9a31172)
- octochemdb: add package and mfsFromEM (6d97f90)
- octochemdb: allow to retrieve thousands of patents in activesOrNaturalsDetailllllllls (c8425c5)
- use octochemdb.cheminfo.org and refactor searchActivesOrNaturals (d216a82)
Bug Fixes
- mass-tools: expose getBestPeaks that was removed in a previous commit (d585116)
- mf-finder: minCharge and maxCharge was incorrectly managed by TargetMassCache (dd53e2e)
Miscellaneous Chores
- remove searchPubchem, searchActivesOrNaturals, searchAndGroupActivesOrNaturals (bac4a83)
- JavaScript
Published by cheminfo-bot almost 3 years ago
mass-tools - v6.12.0
6.12.0 (2023-04-28)
Features
- mf-matcher: allow filtering by absolute charge (8e45b1d)
- JavaScript
Published by cheminfo-bot almost 3 years ago
mass-tools - v6.11.0
6.11.0 (2023-03-28)
Features
- isotopic-distribution: add getVariables method (fc452b9)
- JavaScript
Published by cheminfo-bot almost 3 years ago
mass-tools - v6.10.1
6.10.1 (2023-03-25)
Bug Fixes
- update dependencies (ea54f52)
- JavaScript
Published by cheminfo-bot almost 3 years ago
mass-tools - v6.10.0
6.10.0 (2023-03-21)
Features
- add selectedMasses options in MSComparator (31f830a)
Bug Fixes
- update dependencies (5561677)
- JavaScript
Published by cheminfo-bot almost 3 years ago
mass-tools - v6.9.0
6.9.0 (2023-03-21)
Features
- getInfo returns the sum if many parts (b96a6d6)
- JavaScript
Published by cheminfo-bot almost 3 years ago
mass-tools - v6.8.0
6.8.0 (2023-02-17)
Features
- ms-spectrum: MSComparator has 2 new options: requiredY and minNbCommonPeaks (3fa3ea5)
- JavaScript
Published by cheminfo-bot about 3 years ago
mass-tools - v6.7.0
6.7.0 (2023-02-14)
Features
- mass-tools: expose searchGNPS (5d57a09)
- JavaScript
Published by cheminfo-bot about 3 years ago
mass-tools - v6.5.0
6.5.0 (2023-01-30)
Features
- add CITATION.cff (eabded5)
- JavaScript
Published by cheminfo-bot about 3 years ago
mass-tools - v6.4.0
6.4.0 (2023-01-11)
Features
- add T as group (synonym of 3H) (1ad569a)
- JavaScript
Published by cheminfo-bot about 3 years ago
mass-tools - v6.3.0
6.3.0 (2022-12-20)
Features
- mf-finder: Add docs and filter options to mfIncluded (1c532f3)
- ms-spectrum: add class MSComparator to get spectra similarity (f794da6)
- ms-spectrum: add class MSComparator to get spectra similarity (f794da6)
- JavaScript
Published by cheminfo-bot about 3 years ago
mass-tools - v6.2.0
6.2.0 (2022-12-16)
Features
- mf-finder: add method mfIncluded (88e937c)
- JavaScript
Published by cheminfo-bot about 3 years ago
mass-tools - v6.1.0
6.1.0 (2022-12-13)
Features
- add options in mass-fragmentation to select the fragments to generate (28eaea5)
- emdb: add count in fromMolecules (bd9fab5)
- emdb: add method fromMolecules (ecde199)
- mass-fragmentation: add package mass-fragmentation (1e858bd)
- JavaScript
Published by cheminfo-bot about 3 years ago
mass-tools - v6.0.2
6.0.2 (2022-12-06)
Bug Fixes
- create more compatible build of mass-tools (7b6ded6)
- JavaScript
Published by cheminfo-bot over 3 years ago
mass-tools - v6.0.1
6.0.1 (2022-12-05)
Bug Fixes
- build script for lerna publish (cfca9a8)
- JavaScript
Published by cheminfo-bot over 3 years ago
mass-tools - v6.0.0
6.0.0 (2022-12-05)
⚠ BREAKING CHANGES
- remove default export from all the packages
- emdb: rename DBManager to EMDB
- emdb: remove IsotopicDistribution and MFParser. You should use mass-tools to have those 2 librairies
Miscellaneous Chores
- emdb: remove IsotopicDistribution and MFParser. You should use mass-tools to have those 2 librairies (e6a3cc1)
- emdb: rename DBManager to EMDB (e6a3cc1)
- remove default export from all the packages (e6a3cc1)
- JavaScript
Published by cheminfo-bot over 3 years ago