https://github.com/astro-informatics/s2wav
Differentiable and accelerated wavelet transform on the sphere with JAX
Science Score: 46.0%
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Differentiable and accelerated wavelet transform on the sphere with JAX
Basic Info
- Host: GitHub
- Owner: astro-informatics
- License: mit
- Language: Python
- Default Branch: main
- Homepage: https://astro-informatics.github.io/s2wav/
- Size: 11.9 MB
Statistics
- Stars: 22
- Watchers: 3
- Forks: 0
- Open Issues: 17
- Releases: 1
Topics
Metadata Files
README.md
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Differentiable and accelerated wavelet transform on the sphere
S2WAV is a python package for computing wavelet transforms on the sphere
and rotation group, both in JAX and PyTorch. It leverages autodiff to provide differentiable
transforms, which are also deployable on modern hardware accelerators
(e.g. GPUs and TPUs), and can be mapped across multiple accelerators.
More specifically, S2WAV provides support for scale-discretised
wavelet transforms on the sphere and rotation group (for both real and
complex signals), with support for adjoints where needed, and comes with
a variety of different optimisations (e.g. precompute or not,
multi-resolution algorithms) that one may select depending on available
resources and desired angular resolution $L$. S2WAV is a sister package of
S2FFT, both of which are part of the SAX
project, which aims to provide comprehensive support for differentiable transforms on the
sphere and rotation group.
[!TIP] As of version 1.0.0
S2WAValso provides partial frontend support for PyTorch. In future this will be expanded to full support. Also note that this release also provides JAX support for existing C spherical harmonic libraries, specificallySSHT. This works be wrapping python bindings with custom JAX frontends. Note that currently this C to JAX interoperability is limited to CPU.
Wavelet Transform :zap:
S2WAV is an updated implementation of the scale-discretised wavelet transform on the
sphere, which builds upon the papers of Leistedt et al 2013
and McEwen et al 2017. This wavelet transform is designed to
have excellent localisation and uncorrelation properties, and has been successfully adopted for
various applications e.g. scattering transforms on the sphere McEwen et al 2022.
The wavelet dictionary is constructed by tiling the harmonic line with infinitely differentiable
Cauchy-Schwartz functions, which can straightforwardly be performed in an efficient multiresolution
manner, as in the Euclidean case. This is what the directional wavelet filters look like in pixel space.
Installation :computer:
The Python dependencies for the S2WAV package are listed in the file
requirements/requirements-core.txt and will be automatically installed
into the active python environment by pip when running
bash
pip install s2wav
This will install the core functionality which includes JAX support (including PyTorch support).
Alternatively, the S2WAV package may be installed directly from GitHub by cloning this
repository and then running
bash
pip install .
from the root directory.
Unit tests can then be executed to ensure the installation was successful by first installing the test requirements and then running pytest
bash
pip install -r requirements/requirements-tests.txt
pytest tests/
Documentation for the released version is available here. To build the documentation locally run
bash
pip install -r requirements/requirements-docs.txt
cd docs
make html
open _build/html/index.html
Usage :rocket:
To import and use S2WAV is as simple follows:
``` python
Compute wavelet coefficients
fwav, fscal = s2wav.analysis(f, L, N)
Map back to signal on the sphere
f = s2wav.synthesis(fwav, fscal, L, N) ```
[!NOTE]
However we strongly recommend that the multiresolution argument is set to true, as this will accelerate the transform by a factor of the total number of wavelet scales, which can be around an order of magnitude.
C JAX Frontends for SSHT :bulb:
S2WAV also provides JAX support for SSHT, which is a highly optimised C library which
implements the underlying spherical harmonic transforms. This works by wrapping python
bindings with custom JAX frontends. Note that this C to JAX interoperability is currently
limited to CPU.
For example, one may call these alternate backends for the spherical wavelet transform by:
``` python
Compute wavelet coefficients using SSHT C library backend
fwav, fscal = s2wav.analysis(f, L, N, usecbackend=True)
Map back to signal on the sphere using SSHT C library backend
f = s2wav.synthesis(fwav, fscal, L, N, usecbackend=True) ``` These JAX frontends supports out of the box reverse mode automatic differentiation, and under the hood is simply linking to the C packages you are familiar with. In this way S2fft enhances existing packages with gradient functionality for modern scientific computing or machine learning applications!
For further details on usage see the associated notebooks.
Contributors ✨
We strongly encourage contributions from any interested developers; a simple example would be adding support for new wavelet filters e.g. spherical needlets Chan et al 2016 or spherical ridgelets McEwen & Price 2020! Thanks goes to these wonderful people (emoji key):
Matt Price 💻 👀 📖 🎨 |
Jason McEwen 👀 🎨 |
Alicja Polanska 💻 👀 |
Jessica Whitney 💻 👀 |
Attribution
A BibTeX entry for S2WAV is:
@article{price:s2wav,
author = {Matthew A. Price and Alicja Polanska and Jessica Whitney and Jason D. McEwen},
title = {"Differentiable and accelerated directional wavelet transform on the sphere and ball"},
eprint = {arXiv:2402.01282},
year = {2024}
}
we also request that you cite the following paper
@article{price:s2fft,
author = "Matthew A. Price and Jason D. McEwen",
title = "Differentiable and accelerated spherical harmonic and Wigner transforms",
journal = "Journal of Computational Physics, submitted",
year = "2023",
eprint = "arXiv:2311.14670"
}
in which the core underlying algorithms for the spherical harmonic and Wigner transforms are developed.
License :memo:
Copyright 2024 Matthew Price, Jessica Whtiney, Alicja Polanska, Jason McEwen and contributors.
S2WAV is free software made available under the MIT License. For
details see the LICENSE file.
Owner
- Name: AstroInfo Team @ UCL
- Login: astro-informatics
- Kind: organization
- Location: United Kingdom
- Website: http://www.jasonmcewen.org/
- Repositories: 29
- Profile: https://github.com/astro-informatics
GitHub Events
Total
- Issues event: 2
- Watch event: 6
- Issue comment event: 2
- Push event: 1
Last Year
- Issues event: 2
- Watch event: 6
- Issue comment event: 2
- Push event: 1
Committers
Last synced: 7 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| CosmoMatt | m****e@h****k | 121 |
| Jessica Whitney | j****2@u****k | 43 |
| alicjapolanska | a****2@u****k | 33 |
| allcontributors[bot] | 4****] | 12 |
| Jason McEwen | j****n@g****m | 2 |
| Alicja Polanska | a****a@e****k | 1 |
Committer Domains (Top 20 + Academic)
Packages
- Total packages: 1
-
Total downloads:
- pypi 23 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 5
- Total maintainers: 2
pypi.org: s2wav
Differentiable and accelerated wavelet transforms with JAX
- Homepage: https://github.com/astro-informatics/s2wav
- Documentation: https://s2wav.readthedocs.io/
- License: GNU General Public License v3 (GPLv3)
-
Latest release: 1.0.4
published almost 2 years ago
Rankings
Maintainers (2)
Dependencies
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