PACMAN

PACMAN: A pipeline to reduce and analyze Hubble Wide Field Camera 3 IR Grism data - Published in JOSS (2022)

https://github.com/sebastian-zieba/pacman

Science Score: 95.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 2 DOI reference(s) in README and JOSS metadata
  • Academic publication links
    Links to: joss.theoj.org, zenodo.org
  • Committers with academic emails
    2 of 11 committers (18.2%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
    Published in Journal of Open Source Software

Keywords

astronomy exoplanets hst python wfc3

Keywords from Contributors

jwst

Scientific Fields

Mathematics Computer Science - 84% confidence
Last synced: 4 months ago · JSON representation

Repository

PACMAN is a pipeline to reduce and analyze data collected by Hubble Wide Field Camera 3 (HST/WFC3) using either the G102 or G141 grism.

Basic Info
Statistics
  • Stars: 6
  • Watchers: 3
  • Forks: 5
  • Open Issues: 10
  • Releases: 5
Topics
astronomy exoplanets hst python wfc3
Created over 5 years ago · Last pushed over 1 year ago
Metadata Files
Readme License Code of conduct

README.md

DOI status Documentation Status codecov

PACMAN

Welcome to PACMAN PACMAN is a pipeline to reduce and analyze Hubble/Wide Field Camera 3 (WFC3) observations of transiting exoplanets. The pipeline runs end-to-end, beginning with a time series of 2D images and ending with a spectrum for the planet. PACMAN can easily fit multiple observations simultaneously.

The main steps in the pipeline are:

  • optimally extract spectra from the 'ima' data products provided by STScI
  • bin the spectra into user-specified wavelength bins and output the light curve(s)
  • fit the light curves with a variety of astrophysical models (transit, eclipse, phase curve) and instrument systematic models (visit-long quadratic trends, orbit-long exponential trends)
  • estimate uncertainties on the planet parameters with least-squares, MCMC, or nested sampling

Installation and Documentation

Check out the docs for the latest instructions for how to install and use PACMAN.

Citing PACMAN

Please cite Zieba & Kreidberg (2022) if you use PACMAN in your research. The BibTeX entry for the paper is:

@ARTICLE{2022JOSS....7.4838Z,
       author = {{Zieba}, Sebastian and {Kreidberg}, Laura},
        title = "{PACMAN: A pipeline to reduce and analyze Hubble Wide Field Camera 3 IR Grism data}",
      journal = {The Journal of Open Source Software},
     keywords = {astronomy, exoplanets, python, Python, spectroscopy, HST, photometry, Astrophysics - Instrumentation and Methods for Astrophysics, Astrophysics - Earth and Planetary Astrophysics},
         year = 2022,
        month = dec,
       volume = {7},
       number = {80},
          eid = {4838},
        pages = {4838},
          doi = {10.21105/joss.04838},
archivePrefix = {arXiv},
       eprint = {2212.11421},
 primaryClass = {astro-ph.IM},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2022JOSS....7.4838Z},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

Issues and Contributing

If you are encountering issues with the code, please take a look at the issues page to see if anyone else has encountered similar problems (make sure you check both open and closed GitHub Issues!). If not, raise an issue and we will do our best to address it! When submitting an issues, please provide information like the current PACMAN version and the error message you are receiving in your terminal. Also, have a look at our FAQ page where we collect frequently asked questions. If you are thinking about contributing to PACMAN, please also create an issue, so that we can make sure nobody else is already working on the same feature.

Owner

  • Name: Sebastian Zieba
  • Login: sebastian-zieba
  • Kind: user
  • Location: Heidelberg, Germany
  • Company: Max Planck Institute for Astronomy

JOSS Publication

PACMAN: A pipeline to reduce and analyze Hubble Wide Field Camera 3 IR Grism data
Published
December 21, 2022
Volume 7, Issue 80, Page 4838
Authors
Sebastian Zieba ORCID
Max-Planck-Institut für Astronomie, Königstuhl 17, D-69117 Heidelberg, Germany, Leiden Observatory, Leiden University, Niels Bohrweg 2, 2333CA Leiden, The Netherlands
Laura Kreidberg ORCID
Max-Planck-Institut für Astronomie, Königstuhl 17, D-69117 Heidelberg, Germany
Editor
Juanjo Bazán ORCID
Tags
HST python astronomy exoplanets spectroscopy photometry

GitHub Events

Total
  • Issues event: 3
  • Issue comment event: 1
Last Year
  • Issues event: 3
  • Issue comment event: 1

Committers

Last synced: 5 months ago

All Time
  • Total Commits: 587
  • Total Committers: 11
  • Avg Commits per committer: 53.364
  • Development Distribution Score (DDS): 0.131
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Sebastian (X1) z****a@m****e 510
Ivelina Momcheva i****a@g****m 25
Laura Kreidberg k****g@m****e 21
Marten B. Scheuck 5****k 16
Sebastian Zieba z****a@m****e 4
Nora Bachmann b****n@m****e 3
Dan F-M f****y@g****m 2
Cyril Gapp g****p@m****e 2
Laura Kreidberg l****g@L****e 2
Sebastian Zieba z****a@a****e 1
Kreidberg l****g@c****u 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 4 months ago

All Time
  • Total issues: 22
  • Total pull requests: 12
  • Average time to close issues: 4 months
  • Average time to close pull requests: 16 days
  • Total issue authors: 10
  • Total pull request authors: 8
  • Average comments per issue: 2.55
  • Average comments per pull request: 2.0
  • Merged pull requests: 10
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 3
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 3
  • Pull request authors: 0
  • Average comments per issue: 0.33
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • mar-palt (5)
  • sebastian-zieba (4)
  • gapp-c (4)
  • lkreidberg (2)
  • prajwal309 (1)
  • mm-murphy (1)
  • brackham (1)
  • K-Angelique-Kahle (1)
  • nwhitsett (1)
  • astrobel (1)
Pull Request Authors
  • sebastian-zieba (3)
  • gapp-c (3)
  • n-bachmann (2)
  • ivastar (1)
  • K-Angelique-Kahle (1)
  • lkreidberg (1)
  • MBSck (1)
  • dfm (1)
Top Labels
Issue Labels
bug (6) documentation (3) duplicate (1) enhancement (1)
Pull Request Labels
documentation (1) bug (1)

Dependencies

.github/workflows/ci.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
  • codecov/codecov-action v2 composite
.github/workflows/joss.yml actions
  • actions/checkout v2 composite
  • actions/upload-artifact v2 composite
  • docker://openjournals/paperdraft latest composite
docs/requirements.txt pypi
  • astropy *
  • batman-package *
  • celerite *
  • corner *
  • dynesty *
  • emcee *
  • exotic-ld *
  • h5py *
  • ipython_genutils *
  • matplotlib *
  • myst_parser *
  • nbconvert *
  • nbsphinx *
  • numpy *
  • numpydoc *
  • pandoc *
  • pyyaml *
  • recommonmark *
  • scipy *
  • seaborn *
  • sphinx *
  • sphinx-automodapi *
  • sphinx-gallery *
  • sphinx_rtd_theme *
  • tqdm *
  • uncertainties *
pyproject.toml pypi
.github/workflows/ci_windows.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite