Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/atmoschem/respeciate

https://github.com/atmoschem/respeciate

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 3 committers (33.3%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (10.4%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Basic Info
Statistics
  • Stars: 2
  • Watchers: 1
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created over 5 years ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog License

README.Rmd 

---
output: github_document
---

```{r, echo = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/"
)
```
# respeciate 

[![R build
    status](https://github.com/atmoschem/respeciate/workflows/R-CMD-check/badge.svg)](https://github.com/atmoschem/respeciate/actions)

respeciate gives you access to air pollutant emissions profiles in the [US/EPA Speciate v5.2](https://www.epa.gov/air-emissions-modeling/speciate) and 
[EU/JRC SPECIEUROPE v2.0](https://source-apportionment.jrc.ec.europa.eu/) archives via R.


The installation is:


```{r install, eval = FALSE}
remotes::install_github("atmoschem/respeciate")
```

The currently packaged SPECIATE and SPECIEUROPE archives are:

```{r load}
library(respeciate)
# packaged archives
rsp_info()
```

## Example

Searching the respeciate (SPECIATE + SPECIEUROPE) for a profile, e.g. using a keyword: 

```{r find01}
rsp_find_profile("cement")
```

Limiting the search to just SPECIEUROPE: 

```{r find02}
rsp_find_profile("cement", source="eu")
```

Getting the first profile in SPECIEUROPE:

```{r get, fig.dpi=900, fig.height=5, fig.width=12}
prf <- rsp(1, source="eu")
prf
plot(prf)
```

Comparing that profile with pm profiles in (US EPA) SPECIATE:

```{r output.options, fig.dpi=900, fig.height=7.5, fig.width=15}
rsp_match_profile(prf, rsp_us_pm(),  
                  output = "plot,summary", 
                  layout=c(5,2))
```

Notes: 

* The nearest match to the SPECIEUROPE EU:1 profile Cement from the US EPA SPECIATE PM subset is SPECIATE US:4377 Cement Kiln. 
* In addition, 5/9 of the other nearest matches are cement-related sources.  
* The nearest metrics, pd (Pearson's Distance), srd (Spearman Ranked Distance) and sid (Standardized Identity Distance), all tend to zero for better matches. See ?rsp_match_profile in the packaged respeciate documentation for details and references.

Owner

  • Name: ATMOSCHEM
  • Login: atmoschem
  • Kind: organization

GitHub Events

Total
  • Watch event: 2
  • Issue comment event: 1
  • Push event: 2
  • Pull request event: 5
Last Year
  • Watch event: 2
  • Issue comment event: 1
  • Push event: 2
  • Pull request event: 5

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 90
  • Total Committers: 3
  • Avg Commits per committer: 30.0
  • Development Distribution Score (DDS): 0.289
Past Year
  • Commits: 64
  • Committers: 1
  • Avg Commits per committer: 64.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
karlropkins k****s@i****k 64
ibarraespinosa s****a@u****r 14
karlropkins k****s@g****m 12
Committer Domains (Top 20 + Academic)
usp.br: 1 its.leeds.ac.uk: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 1
  • Total pull requests: 13
  • Average time to close issues: N/A
  • Average time to close pull requests: 1 day
  • Total issue authors: 1
  • Total pull request authors: 1
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.38
  • Merged pull requests: 9
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 3
  • Average time to close issues: N/A
  • Average time to close pull requests: 9 minutes
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.33
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • ibarraespinosa (1)
Pull Request Authors
  • karlropkins (18)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

DESCRIPTION cran
  • R >= 3.5.0 depends
.github/workflows/R-CMD-check.yml actions
  • actions/cache v2 composite
  • actions/checkout v2 composite
  • actions/upload-artifact main composite
  • r-lib/actions/setup-pandoc v1 composite
  • r-lib/actions/setup-r v1 composite