EvoDynamics.jl
EvoDynamics.jl: a framework for modeling eco-evolutionary dynamics - Published in JOSS (2022)
Science Score: 93.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 4 DOI reference(s) in README and JOSS metadata -
✓Academic publication links
Links to: joss.theoj.org -
○Committers with academic emails
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○Institutional organization owner
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✓JOSS paper metadata
Published in Journal of Open Source Software
Repository
Simulation of eco-evolutionary dynamics on multi-trait networks
Basic Info
- Host: GitHub
- Owner: kavir1698
- License: mit
- Language: Julia
- Default Branch: master
- Homepage: https://kavir1698.github.io/EvoDynamics.jl/dev
- Size: 3.74 MB
Statistics
- Stars: 2
- Watchers: 2
- Forks: 1
- Open Issues: 2
- Releases: 18
Metadata Files
README.md
EvoDynamics.jl
EvoDynamics.jl is a powerful framework designed to explore and understand the dynamics of biological systems across multiple scales. It offers a comprehensive set of tools and models to study evolutionary and ecological processes, providing a bridge between genotypes, phenotypes, and their intricate interactions with the environment and other species. By incorporating eco-evolutionary feedbacks, EvoDynamics.jl allows for the investigation of rapidly evolving populations that continuously adapt to changing conditions, particularly in antagonistic interactions, competitive scenarios, and mutualistic relationships.
See the for more details.
Installation
Install using the following command in Julia REPL:
julia
]add EvoDynamics
Contributions
Any contribution to EvoDynamics.jl is welcome in the following ways:
- Modifying the code or documentation with a pull request.
- Reporting bugs and suggestions in the issues section of the project's Github.
Previewing Documentation Edits
Modifications to the documentation can be previewed by building the documentation locally, which is made possible by a script located in docs/make.jl. The Documenter package is required and can be installed by running import Pkg; Pkg.add("Documenter") in a REPL session. Then the documentation can be built and previewed in build/ first by running julia docs/make.jl from a terminal.
Owner
- Name: Ali R. Vahdati
- Login: kavir1698
- Kind: user
- Location: Zurich, Switzerland
- Website: vahdati.info
- Repositories: 3
- Profile: https://github.com/kavir1698
Evolutionary biology, University of Zurich
JOSS Publication
EvoDynamics.jl: a framework for modeling eco-evolutionary dynamics
Authors
Department of Anthropology, University of Zurich, Zurich, Switzerland
Department of Fish Ecology and Evolution, Eawag, Centre of Ecology, Evolution and Biogeochemistry, Switzerland, Institute of Ecology and Evolution, Aquatic Ecology, University of Bern, Bern, Switzerland.
Editor
Mikkel Meyer Andersen
Tags
evolutionary biology ecology agent-based modeling genotype-phenotype map genetic architectureGitHub Events
Total
Last Year
Committers
Last synced: 7 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Ali R. Vahdati | a****r@g****m | 240 |
| melian009 | c****n@e****h | 2 |
| Julia TagBot | 5****t | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 19
- Total pull requests: 18
- Average time to close issues: 5 months
- Average time to close pull requests: 6 days
- Total issue authors: 4
- Total pull request authors: 2
- Average comments per issue: 1.0
- Average comments per pull request: 0.39
- Merged pull requests: 18
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- kavir1698 (13)
- slwu89 (3)
- tijeco (2)
- JuliaTagBot (1)
Pull Request Authors
- kavir1698 (17)
- JuliaTagBot (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
- Total downloads: unknown
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 24
juliahub.com: EvoDynamics
Simulation of eco-evolutionary dynamics on multi-trait networks
- Homepage: https://kavir1698.github.io/EvoDynamics.jl/dev
- Documentation: https://docs.juliahub.com/General/EvoDynamics/stable/
- License: MIT
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Latest release: 0.17.0
published over 3 years ago