https://github.com/b-ummi/schema_refinery - v0.4.0

• Optimized all modules to improve efficiency and the accuracy of the results.
• Restructured output files to improve readability and simplify parsing.
• Fixed several issues.

- Python
Published by rfm-targa 10 months ago

https://github.com/b-ummi/schema_refinery - Modules to download assemblies and annotate schemas

This release adds two modules: the DownloadAssemblies module to download genome assemblies from the NCBI and the ENA661k dataset and the SchemaAnnotation module to annotate wg/cgMLST schemas.

- Python
Published by rfm-targa over 2 years ago

https://github.com/b-ummi/schema_refinery - Initial development

This release includes a collection of scripts to help create, annotate and curate whole-genome multilocus sequence typing (wgMLST) schemas created with chewBBACA.

- Python
Published by rfm-targa over 4 years ago