https://github.com/balaje/gridap.jl
Grid-based approximation of partial differential equations in Julia
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Grid-based approximation of partial differential equations in Julia
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Fork of gridap/Gridap.jl
Created about 5 years ago
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https://github.com/Balaje/Gridap.jl/blob/master/
#| **Documentation** | |:------------ | | [](https://gridap.github.io/Gridap.jl/stable) [](https://gridap.github.io/Gridap.jl/dev) | |**Build Status** | | [](https://github.com/gridap/Gridap.jl/actions?query=workflow%3ACI) [](https://codecov.io/gh/gridap/Gridap.jl) | | **Community** | | [](https://gitter.im/Gridap-jl/community?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge) | | **Citation** | | [](https://doi.org/10.21105/joss.02520) | ## What Gridap provides a set of tools for the grid-based approximation of partial differential equations (PDEs) written in the [Julia programming language](https://julialang.org/). The library currently supports linear and nonlinear PDE systems for scalar and vector fields, single and multi-field problems, conforming and nonconforming finite element (FE) discretizations, on structured and unstructured meshes of simplices and n-cubes. Gridap is extensible and modular. One can implement new FE spaces, new reference elements, use external mesh generators, linear solvers, post-processing tools, etc. See, e.g., the list of available [Gridap plugins](https://github.com/gridap/Gridap.jl#plugins). Gridap has a very expressive API allowing to solve complex PDEs with very few lines of code. The user can write the underlying weak form with a syntax almost 1:1 to the mathematical notation, and Gridap generates an efficient FE assembly loop automatically by leveraging the Julia JIT compiler. For instance, the weak form for an interior penalty DG method for the Poisson equation can be specified simply as: ```julia a(u,v) = ( (v)(u) )*d + ( (/h)*v*u - v*(n_(u)) - (n_(v))*u )*d + ( (/h)*jump(v*n_)jump(u*n_) - jump(v*n_)mean((u)) - mean((v))jump(u*n_) )*d l(v) = ( v*f )*d + ( (/h)*v*u - (n_(v))*u )*d ``` See the complete code [here](https://github.com/gridap/Gridap.jl/blob/master/test/GridapTests/PoissonDGTests.jl). As an example for multi-field PDEs, this is how the weak form for the Stokes equation with Neumann boundary conditions can be specified: ```julia a((u,p),(v,q)) = ( (v)(u) - (v)*p + q*(u) )*d l((v,q)) = ( vf + q*g )*d + ( v(n_u) - (n_v)*p )*d ``` See the complete code [here](https://github.com/gridap/Gridap.jl/blob/master/test/GridapTests/StokesTaylorHoodTests.jl). ## Documentation - [**STABLE**](https://gridap.github.io/Gridap.jl/stable) — **Documentation for the most recently tagged version of Gridap.jl.** - [**DEVEL**](https://gridap.github.io/Gridap.jl/dev) — *Documentation for the in-development version of Gridap.* ## Tutorials A hands-on user-guide to the library is available as a set of [tutorials](https://github.com/gridap/Tutorials). They are available as Jupyter notebooks and html pages. ## Installation Gridap is a registered package in the official [Julia package registry](https://github.com/JuliaRegistries/General). Thus, the installation of Gridap is straight forward using the [Julia's package manager](https://julialang.github.io/Pkg.jl/v1/). Open the Julia REPL, type `]` to enter package mode, and install as follows ```julia pkg> add Gridap ``` ## Plugins - [GridapGmsh](https://github.com/gridap/GridapGmsh.jl) Generate a FE mesh with [GMSH](www.gmsh.info) and use it in Gridap. - [GridapMakie](https://github.com/gridap/GridapMakie.jl) Makie plotting recipies for Gridap. - [GridapPardiso](https://github.com/gridap/GridapPardiso.jl) Use the [Intel Pardiso MKL direct sparse solver](https://software.intel.com/en-us/mkl-developer-reference-fortran-intel-mkl-pardiso-parallel-direct-sparse-solver-interface) in Gridap. - [GridapEmbedded](https://github.com/gridap/GridapEmbedded.jl) Embedded finite elements in Julia. - [GridapODEs](https://github.com/gridap/GridapODEs.jl) Gridap support for time-dependent PDEs. - [GridapDistributed](https://github.com/gridap/GridapDistributed.jl) Distributed-memory extension of Gridap. ## Examples These are some popular PDEs solved with the Gridap library. Examples taken from the [Gridap Tutorials](https://github.com/gridap/Tutorials). |  |  |  |  | |:-------------:|:-------------:|:-----:|:----:| | [Poisson equation](https://gridap.github.io/Tutorials/dev/pages/t001_poisson/) | [Linear elasticity](https://gridap.github.io/Tutorials/dev/pages/t003_elasticity/) | [Hyper-elasticity](https://gridap.github.io/Tutorials/dev/pages/t005_hyperelasticity/) | [p-Laplacian](https://gridap.github.io/Tutorials/dev/pages/t004_p_laplacian/) | |  |  | |  | | [Poisson eq. with DG](https://gridap.github.io/Tutorials/dev/pages/t006_dg_discretization/) | [Darcy eq. with RT](https://gridap.github.io/Tutorials/dev/pages/t007_darcy/) | [Incompressible Navier-Stokes](https://gridap.github.io/Tutorials/dev/pages/t008_inc_navier_stokes/) | [Isotropic damage](https://gridap.github.io/Tutorials/dev/pages/t010_isotropic_damage/) | ## Gridap community You can ask questions and interact with the Gridap community on the Julia Slack channel #gridap (see [here](https://julialang.org/slack/) how to join). or our [gitter](https://gitter.im/Gridap-jl/community). ## Contributing to Gridap Gridap is a collaborative project open to contributions. If you want to contribute, please take into account: - Before opening a PR with a significant contribution, contact the project administrators, e.g., by writing a message in [our gitter chat](https://gitter.im/Gridap-jl/community) or by opening an issue describing what you are willing to implement. Wait for feed-back. - Carefully read and follow the instructions in the [CONTRIBUTING.md](https://github.com/gridap/Gridap.jl/blob/master/CONTRIBUTING.md) file. - Carefully read and follow the instructions in the [CODE_OF_CONDUCT.md](https://github.com/gridap/Gridap.jl/blob/master/CODE_OF_CONDUCT.md) file. - Open a PR with your contribution. Want to help? We have a number of [issues waiting for help](https://github.com/gridap/Gridap.jl/labels/help%20wanted). You can start contributing to the Gridap project by solving some of those issues. ## How to cite Gridap In order to give credit to the `Gridap` contributors, we simply ask you to cite the refence below in any publication in which you have made use of `Gridap` packages: ``` @article{Badia2020, doi = {10.21105/joss.02520}, url = {https://doi.org/10.21105/joss.02520}, year = {2020}, publisher = {The Open Journal}, volume = {5}, number = {52}, pages = {2520}, author = {Santiago Badia and Francesc Verdugo}, title = {Gridap: An extensible Finite Element toolbox in Julia}, journal = {Journal of Open Source Software} } ``` ## Contact Please, contact the project administrators, [Santiago Badia](mailto:santiago.badia@monash.edu) and [Francesc Verdugo](mailto:fverdugo@cimne.upc.edu), for further questions about licenses and terms of use.
Owner
- Name: Balaje K
- Login: Balaje
- Kind: user
- Location: Umeå
- Website: https://balajekkb.com/
- Twitter: BalajeKkb
- Repositories: 20
- Profile: https://github.com/Balaje
BITS Pilani; PhD University of Newcastle; Postdoc at Umeå University
| **Documentation** |
|:------------ |
| [](https://gridap.github.io/Gridap.jl/stable) [](https://gridap.github.io/Gridap.jl/dev) |
|**Build Status** |
| [](https://github.com/gridap/Gridap.jl/actions?query=workflow%3ACI) [](https://codecov.io/gh/gridap/Gridap.jl) |
| **Community** |
| [](https://gitter.im/Gridap-jl/community?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge) |
| **Citation** |
| [](https://doi.org/10.21105/joss.02520) |
## What
Gridap provides a set of tools for the grid-based approximation of partial differential equations (PDEs) written in the
[Julia programming language](https://julialang.org/). The library currently supports linear and nonlinear PDE systems for scalar and vector fields, single and multi-field problems, conforming and nonconforming finite element (FE) discretizations, on structured and unstructured meshes of simplices and n-cubes. Gridap is extensible and modular. One can implement new FE spaces, new reference elements, use external mesh generators, linear solvers, post-processing tools, etc. See, e.g., the list of available [Gridap plugins](https://github.com/gridap/Gridap.jl#plugins).
Gridap has a very expressive API allowing to solve complex PDEs with very few lines of code. The user can write the underlying weak form with a syntax almost 1:1 to the mathematical notation, and Gridap generates an efficient FE assembly loop automatically by leveraging the Julia JIT compiler. For instance, the weak form for an interior penalty DG method for the Poisson equation can be specified simply as:
```julia
a(u,v) =
( (v)(u) )*d +
( (/h)*v*u - v*(n_(u)) - (n_(v))*u )*d +
(
(/h)*jump(v*n_)jump(u*n_) -
jump(v*n_)mean((u)) -
mean((v))jump(u*n_)
)*d
l(v) =
( v*f )*d +
( (/h)*v*u - (n_(v))*u )*d
```
See the complete code [here](https://github.com/gridap/Gridap.jl/blob/master/test/GridapTests/PoissonDGTests.jl). As an example for multi-field PDEs, this is how the weak form for the Stokes equation with Neumann boundary conditions can be specified:
```julia
a((u,p),(v,q)) =
( (v)(u) - (v)*p + q*(u) )*d
l((v,q)) =
( vf + q*g )*d +
( v(n_u) - (n_v)*p )*d
```
See the complete code [here](https://github.com/gridap/Gridap.jl/blob/master/test/GridapTests/StokesTaylorHoodTests.jl).
## Documentation
- [**STABLE**](https://gridap.github.io/Gridap.jl/stable) — **Documentation for the most recently tagged version of Gridap.jl.**
- [**DEVEL**](https://gridap.github.io/Gridap.jl/dev) — *Documentation for the in-development version of Gridap.*
## Tutorials
A hands-on user-guide to the library is available as a set of [tutorials](https://github.com/gridap/Tutorials). They are available as Jupyter notebooks and html pages.
## Installation
Gridap is a registered package in the official [Julia package registry](https://github.com/JuliaRegistries/General). Thus, the installation of Gridap is straight forward using the [Julia's package manager](https://julialang.github.io/Pkg.jl/v1/). Open the Julia REPL, type `]` to enter package mode, and install as follows
```julia
pkg> add Gridap
```
## Plugins
- [GridapGmsh](https://github.com/gridap/GridapGmsh.jl) Generate a FE mesh with [GMSH](www.gmsh.info) and use it in Gridap.
- [GridapMakie](https://github.com/gridap/GridapMakie.jl) Makie plotting recipies for Gridap.
- [GridapPardiso](https://github.com/gridap/GridapPardiso.jl) Use the [Intel Pardiso MKL direct sparse solver](https://software.intel.com/en-us/mkl-developer-reference-fortran-intel-mkl-pardiso-parallel-direct-sparse-solver-interface) in Gridap.
- [GridapEmbedded](https://github.com/gridap/GridapEmbedded.jl) Embedded finite elements in Julia.
- [GridapODEs](https://github.com/gridap/GridapODEs.jl) Gridap support for time-dependent PDEs.
- [GridapDistributed](https://github.com/gridap/GridapDistributed.jl) Distributed-memory extension of Gridap.
## Examples
These are some popular PDEs solved with the Gridap library. Examples taken from the [Gridap Tutorials](https://github.com/gridap/Tutorials).
|  |  |  |  |
|:-------------:|:-------------:|:-----:|:----:|
| [Poisson equation](https://gridap.github.io/Tutorials/dev/pages/t001_poisson/) | [Linear elasticity](https://gridap.github.io/Tutorials/dev/pages/t003_elasticity/) | [Hyper-elasticity](https://gridap.github.io/Tutorials/dev/pages/t005_hyperelasticity/) | [p-Laplacian](https://gridap.github.io/Tutorials/dev/pages/t004_p_laplacian/) |
|  |  | |  |
| [Poisson eq. with DG](https://gridap.github.io/Tutorials/dev/pages/t006_dg_discretization/) | [Darcy eq. with RT](https://gridap.github.io/Tutorials/dev/pages/t007_darcy/) | [Incompressible Navier-Stokes](https://gridap.github.io/Tutorials/dev/pages/t008_inc_navier_stokes/) | [Isotropic damage](https://gridap.github.io/Tutorials/dev/pages/t010_isotropic_damage/) |
## Gridap community
You can ask questions and interact with the Gridap community on the Julia Slack channel #gridap (see [here](https://julialang.org/slack/) how to join). or our [gitter](https://gitter.im/Gridap-jl/community).
## Contributing to Gridap
Gridap is a collaborative project open to contributions. If you want to contribute, please take into account:
- Before opening a PR with a significant contribution, contact the project administrators, e.g., by writing a message in [our gitter chat](https://gitter.im/Gridap-jl/community) or by opening an issue describing what you are willing to implement. Wait for feed-back.
- Carefully read and follow the instructions in the [CONTRIBUTING.md](https://github.com/gridap/Gridap.jl/blob/master/CONTRIBUTING.md) file.
- Carefully read and follow the instructions in the [CODE_OF_CONDUCT.md](https://github.com/gridap/Gridap.jl/blob/master/CODE_OF_CONDUCT.md) file.
- Open a PR with your contribution.
Want to help? We have a number of [issues waiting for help](https://github.com/gridap/Gridap.jl/labels/help%20wanted). You can start contributing to the Gridap project by solving some of those issues.
## How to cite Gridap
In order to give credit to the `Gridap` contributors, we simply ask you to cite the refence below in any publication in which you have made use of `Gridap` packages:
```
@article{Badia2020,
doi = {10.21105/joss.02520},
url = {https://doi.org/10.21105/joss.02520},
year = {2020},
publisher = {The Open Journal},
volume = {5},
number = {52},
pages = {2520},
author = {Santiago Badia and Francesc Verdugo},
title = {Gridap: An extensible Finite Element toolbox in Julia},
journal = {Journal of Open Source Software}
}
```
## Contact
Please, contact the project administrators, [Santiago Badia](mailto:santiago.badia@monash.edu) and [Francesc Verdugo](mailto:fverdugo@cimne.upc.edu), for further questions about licenses and terms of use.