PySD

PySD: System Dynamics Modeling in Python - Published in JOSS (2022)

https://github.com/sdxorg/pysd

Science Score: 100.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
Found CITATION.cff file
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codemeta.json file
Found codemeta.json file
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.zenodo.json file
Found .zenodo.json file
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DOI references
Found 4 DOI reference(s) in README and JOSS metadata
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Academic publication links
Links to: joss.theoj.org
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Committers with academic emails
2 of 21 committers (9.5%) from academic institutions
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Institutional organization owner
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JOSS paper metadata
Published in Journal of Open Source Software

Keywords from Contributors

mesh salib

Scientific Fields

Mathematics Computer Science - 84% confidence

Earth and Environmental Sciences Physical Sciences - 62% confidence

Last synced: 4 months ago · JSON representation ·

Repository

System Dynamics Modeling in Python

Basic Info

Host: GitHub
Owner: SDXorg
License: mit
Language: Python
Default Branch: master
Homepage: http://pysd.readthedocs.org/
Size: 22.8 MB

Statistics

Stars: 420
Watchers: 28
Forks: 91
Open Issues: 41
Releases: 58

Created about 12 years ago · Last pushed 4 months ago

Metadata Files

Readme License Citation

PySD

PySD Logo

This project is a library for running System Dynamics (SD) models in Python, with the purpose of improving integration of Big Data and Machine Learning into the SD workflow.

The current version needs to run at least Python 3.9.

Resources

See the project documentation for information about:

For standard methods for data analysis with SD models, see the PySD Cookbook, containing (for example):

Why create a new SD simulation engine?

There are a number of great SD programs out there (Vensim, iThink, AnyLogic, Insight Maker, and others). In order not to waste our effort, or fall victim to the Not-Invented-Here fallacy, we should have a very good reason for starting a new project.

That reason is this: There is a whole world of computational tools being developed in the larger data science community. System dynamicists should directly use the tools that other people are building, instead of replicating their functionality in SD specific software. The best way to do this is to bring specific SD functionality to the domain where those other tools are being developed.

This approach allows SD modelers to take advantage of the most recent developments in data science, and focus our efforts on improving the part of the stack that is unique to System Dynamics modeling.

Cloning this repository

If you'd like to work with this repository directly, you'll need to use a recursive git checkout in order to properly load the test suite (sorry..)

The command should be something like:

shell git clone --recursive https://github.com/SDXorg/pysd.git

Extensions

You can use PySD in R via the PySD2R package, also available on CRAN.

Contributing

PySD is currently a community-maintained project, any contribution is welcome.

Many people have contributed to developing this project - by submitting code, bug reports, and advice. Main historic changes in PySD are described in the About PySD section. The Developer Documentation could help new developers.

The code for this package is available at: https://github.com/SDXorg/pysd

Join our slack channel in sd-tools-and-methodology-community.

Owner

Name: SDXorg
Login: SDXorg
Kind: organization

Repositories: 6
Profile: https://github.com/SDXorg

Open source tools for system dynamics

JOSS Publication

PySD: System Dynamics Modeling in Python

Published

October 17, 2022

DOI

10.21105/joss.04329

Volume 7, Issue 78, Page 4329

Authors

Eneko Martin-Martinez

CREAF, Centre de Recerca Ecològica i Aplicacions Forestals, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain

Roger Samsó

CREAF, Centre de Recerca Ecològica i Aplicacions Forestals, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain

James Houghton

Computational Social Science Lab, University of Pennsylvania, Philadelphia PA, 19104, United States of America

Jordi Solé

CREAF, Centre de Recerca Ecològica i Aplicacions Forestals, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain, Departament de Dinàmica de la Terra i l'Oceà, Universitat de Barcelona (UB) E08007, Catalonia, Spain

Editor

Pierre de Buyl

Citation (citation.cff)

cff-version: 1.2.0
title: 'PySD: System Dynamics Modeling in Python'
message: 'If you use this software, please cite it as below.'
type: software
authors:
  - given-names: Eneko
    family-names: Martin-Martinez
    email: eneko.martin.martinez@gmail.com
    affiliation: >-
      Centre for Ecological Research and Forestry
      Applications (CREAF)
    orcid: 'https://orcid.org/0000-0002-9213-7818'
  - given-names: Roger
    family-names: Samsó
    affiliation: >-
      Centre for Ecological Research and Forestry
      Applications (CREAF)
    orcid: 'https://orcid.org/0000-0003-0348-3047'
  - family-names: Houghton
    given-names: James
    affiliation: >-
      Computational Social Science Lab, University of
      Pennsylvania
    email: james.p.houghton@gmail.com
  - given-names: Jordi
    family-names: Solé
    orcid: 'https://orcid.org/0000-0002-2371-1652'
    affiliation: >-
      Centre for Ecological Research and Forestry
      Applications (CREAF);
      Department of Earth and Ocean Dynamics,
      Faculty of Earth Sciences,
      University of Barcelona
version: 3.0.1
doi: 10.5281/zenodo.6583528
date-released: 2022-05-26
journal: "Journal of Open Source Software"
keywords:
  - System Dynamics
  - Vensim
  - XMILE
  - Python
license: MIT
repository: "https://github.com/JamesPHoughton/pysd"
url: "https://github.com/JamesPHoughton/pysd"
year: 2022
month: 6
references:
  - type: conference-paper
    scope: Cite alos the PySD introductory paper (conference-paper)
    authors:
    - family-names: Houghton
      given-names: James
    - family-names: Siegel
      given-names: Michael
    title: "Advanced data analytics for system dynamics models using PySD."
    year: 2015
    publisher: "System Dynamics Society"
    journal: "33rd International Conference of the System Dynamics Society 2015"
    isbn: 9781510815056
    url: "https://github.com/JamesPHoughton/pysd/blob/master/docs/PySD%20Intro%20Paper%20Preprint.pdf"

preferred-citation:
  type: article
  authors:
    - given-names: Eneko
      family-names: Martin-Martinez
      email: eneko.martin.martinez@gmail.com
      affiliation: >-
        Centre for Ecological Research and Forestry
        Applications (CREAF)
      orcid: 'https://orcid.org/0000-0002-9213-7818'
    - given-names: Roger
      family-names: Samsó
      affiliation: >-
        Centre for Ecological Research and Forestry
        Applications (CREAF)
      orcid: 'https://orcid.org/0000-0003-0348-3047'
    - family-names: Houghton
      given-names: James
      affiliation: >-
        Computational Social Science Lab, University of
        Pennsylvania
      email: james.p.houghton@gmail.com
    - given-names: Jordi
      family-names: Solé
      orcid: 'https://orcid.org/0000-0002-2371-1652'
      affiliation: >-
        Centre for Ecological Research and Forestry
        Applications (CREAF);
        Department of Earth and Ocean Dynamics,
        Faculty of Earth Sciences,
        University of Barcelona
  doi: 10.5281/zenodo.6583528
  title: 'PySD: System Dynamics Modeling in Python'
  journal: "Journal of Open Source Software"
  year: 2022
  url: "https://github.com/JamesPHoughton/pysd"

GitHub Events

Total

Create event: 11
Release event: 1
Issues event: 3
Watch event: 44
Delete event: 11
Issue comment event: 12
Push event: 21
Pull request event: 21
Fork event: 4

Last Year

Create event: 11
Release event: 1
Issues event: 3
Watch event: 44
Delete event: 11
Issue comment event: 12
Push event: 21
Pull request event: 21
Fork event: 4

Committers

Last synced: 5 months ago

All Time

Total Commits: 1,160
Total Committers: 21
Avg Commits per committer: 55.238
Development Distribution Score (DDS): 0.576

Past Year

Commits: 11
Committers: 3
Avg Commits per committer: 3.667
Development Distribution Score (DDS): 0.455

Top Committers

Name	Email	Commits
Eneko Martin Martinez	e**z@g**m	492
James Houghton	J**n@g**m	253
Roger Samsó	r**o@g**m	138
Alexey Mulyukin	a**n@a**u	87
Maria	m**o@a**s	49
julienmalard	j**d@m**a	41
sepiatone	s**e@y**m	23
dependabot[bot]	4****]	18
SimonStrong	s**t@g**m	15
ConnectedSystems	t**i@g**m	11
pbreach	p**h@u**a	7
Diego Rodrigo	d**-@h**m	4
Aina Rasoldier	a**r@h**r	4
Manuel Ruh	m**e@g**m	3
Keith Citrenbaum	k**m@s**m	3
Joona Tuovinen	j**n@g**m	3
Ewout ter Hoeven	E**n@s**l	3
Bruno P. Kinoshita	k****w	2
mhy05	m**n@g**m	2
Ben Slavin	b**n@b**m	1
Giorgos Drosos	5****s	1

Committer Domains (Top 20 + Academic)

benslavin.com: 1 student.tudelft.nl: 1 sosacorp.com: 1 uwo.ca: 1 mail.mcgill.ca: 1 alumnos.uva.es: 1 arcadia.spb.ru: 1

Issues and Pull Requests

Last synced: 4 months ago

All Time

Total issues: 84
Total pull requests: 80
Average time to close issues: over 1 year
Average time to close pull requests: about 2 months
Total issue authors: 33
Total pull request authors: 11
Average comments per issue: 3.45
Average comments per pull request: 2.53
Merged pull requests: 72
Bot issues: 0
Bot pull requests: 21

Past Year

Issues: 4
Pull requests: 20
Average time to close issues: about 2 months
Average time to close pull requests: 8 days
Issue authors: 4
Pull request authors: 3
Average comments per issue: 1.5
Average comments per pull request: 0.1
Merged pull requests: 18
Bot issues: 0
Bot pull requests: 10

View more stats

Top Authors

Issue Authors

enekomartinmartinez (25)
rogersamso (11)
JamesPHoughton (10)
marrobl (4)
lionel42 (4)
blsqr (2)
hyunjimoon (2)
sanketme (2)
rachieg2 (1)
akuptel (1)
universmile (1)
prasri92 (1)
marika-kac (1)
alexprey (1)
pbreach (1)

Pull Request Authors

enekomartinmartinez (36)
dependabot[bot] (28)
rogersamso (16)
EwoutH (3)
benslavin (2)
kinow (2)
hyunjimoon (1)
lionel42 (1)
equihuam (1)
gdrosos (1)
JamesPHoughton (1)

Top Labels

Issue Labels

vensim (22) bug (15) python builder (9) performance (8) enhancement (7) xmile (2) partially implemented (2) good first issue (2) wontfix (1) contributions are welcome (1)

Pull Request Labels

dependencies (28) bug (6) vensim (6) github_actions (5) python builder (4) performance (1)

Packages

Total packages: 2
Total downloads:
- pypi 1,723 last-month

Total dependent packages: 6
(may contain duplicates)
Total dependent repositories: 18
(may contain duplicates)
Total versions: 97
Total maintainers: 2

pypi.org: pysd

System Dynamics Modeling in Python

Homepage: https://github.com/SDXorg/pysd
Documentation: https://pysd.readthedocs.io/
License: LICENSE
Latest release: 3.14.3
published 9 months ago

Versions: 70
Dependent Packages: 5
Dependent Repositories: 17
Downloads: 1,723 Last month

Rankings

Dependent packages count: 1.6%

Dependent repos count: 3.5%

Stargazers count: 3.6%

Average: 4.2%

Forks count: 4.9%

Downloads: 7.4%

Maintainers (2)

James.P.Houghton alexprey

Last synced: 4 months ago

conda-forge.org: pysd

Homepage: https://github.com/SDXorg/pysd
License: MIT
Latest release: 3.8.0
published about 3 years ago

Versions: 27
Dependent Packages: 1
Dependent Repositories: 1

Rankings

Forks count: 20.3%

Stargazers count: 23.0%

Average: 24.2%

Dependent repos count: 24.4%

Dependent packages count: 29.0%

Last synced: 4 months ago

Dependencies

docs/requirements.txt pypi

jinja2 ==3.0.0
readthedocs-sphinx-search ==0.1.1
sphinx ==4.2.0
sphinx_rtd_theme ==1.0.0

requirements.txt pypi

black *
chardet *
lxml *
openpyxl *
pandas *
parsimonious *
portion *
progressbar2 *
regex *
scipy *
xarray *
xlrd *

tests/requirements.txt pypi

coverage *
coveralls *
psutil *
pytest *
pytest-cov *
pytest-mock *

.github/workflows/build-docs.yml actions

actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/ci.yml actions

actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/link-check.yml actions

actions/checkout v3 composite
lycheeverse/lychee-action v1.5.4 composite

.github/workflows/python-publish.yml actions

actions/checkout v3 composite
actions/setup-python v4 composite

setup.py pypi

PySD

Science Score: 100.0%

Keywords from Contributors

Scientific Fields

Repository

Basic Info

Statistics

Metadata Files

README.md

PySD

Resources

Why create a new SD simulation engine?

Cloning this repository

Extensions

Contributing

Owner

JOSS Publication

PySD: System Dynamics Modeling in Python

Authors

Editor

Tags

Citation (citation.cff)

GitHub Events

Total

Last Year

Committers

All Time

Past Year

Top Committers

Committer Domains (Top 20 + Academic)

Issues and Pull Requests

All Time

Past Year

Top Authors

Issue Authors

Pull Request Authors

Top Labels

Issue Labels

Pull Request Labels

Packages

pypi.org: pysd

Rankings

Maintainers (2)

conda-forge.org: pysd

Rankings

Dependencies