rigatoni
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (7.6%) to scientific vocabulary
Last synced: 6 months ago
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JSON representation
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Repository
Basic Info
- Host: GitHub
- Owner: jframi
- Language: R
- Default Branch: main
- Homepage: https://jframi.github.io/rigatoni/
- Size: 7.68 MB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 0
Created almost 5 years ago
· Last pushed over 1 year ago
Metadata Files
Readme
Citation
README.Rmd
---
output: github_document
---
```{r, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = "100%"
)
```
# Rigatoni
Rigatoni is an experimental port, based on the EBImage package, of the grainito (https://github.com/jframi/grainito) ImageJ macro.
## Installation
Install dependencies from CRAN
``` r
install.packages("data.table")
install.packages("polylabelr")
install.packages("polyclip")
install.packages("devtools")
```
Install dependencies from github
``` r
devtools::install_github("MomX/Momocs2")
```
Install dependencies from Bioconductor
```r
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("EBImage")
```
Then install Rigatoni from github
```r
devtools::install_github("jframi/rigatoni")
```
## Getting started
Read the [Vignette](https://jframi.github.io/rigatoni/articles/Rigatoni.html) to get started
Owner
- Login: jframi
- Kind: user
- Repositories: 2
- Profile: https://github.com/jframi
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!
cff-version: 1.2.0
title: Rigatoni
message: >-
If you use this software, please cite it using the
metadata from this file.
type: software
authors:
- given-names: Jean-François
family-names: Rami
identifiers:
- type: url
value: 'https://github.com/jframi/rigatoni'
repository-code: 'https://github.com/jframi/rigatoni'
version: 0.9.3
GitHub Events
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Dependencies
DESCRIPTION
cran
- EBImage * depends
- data.table * depends
- EBImage * imports
- data.table * imports
- knitr * suggests
- rmarkdown * suggests