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Recent Releases of https://github.com/bamresearch/probeye

https://github.com/bamresearch/probeye - Probeye with embedded approach

This release is the first official release for probeye, which will allow for its reference in Zenodo. It includes both the consolidated implementation of probeye, but also adds likelihood formulations for embedded model form uncertainty quantification, solves the copy/deepcopy issues with DolfinX models and simplifies the interface access for the implementaition of new solvers.

What's Changed

  • Proposal for probeye's first version by @aklawonn in https://github.com/BAMresearch/probeye/pull/1
  • The attributes of the InferenceProblem's parameters cannot be changed… by @aklawonn in https://github.com/BAMresearch/probeye/pull/13
  • Type of sensors by @aklawonn in https://github.com/BAMresearch/probeye/pull/22
  • Coupling parameters and priors by @aklawonn in https://github.com/BAMresearch/probeye/pull/23
  • added github badges by @aklawonn in https://github.com/BAMresearch/probeye/pull/27
  • Torch implementation by @aklawonn in https://github.com/BAMresearch/probeye/pull/28
  • jacobi matrix reduced from 3d to 2d by @aklawonn in https://github.com/BAMresearch/probeye/pull/29
  • Solver classes by @aklawonn in https://github.com/BAMresearch/probeye/pull/31
  • logging by @aklawonn in https://github.com/BAMresearch/probeye/pull/33
  • vector-parameters by @aklawonn in https://github.com/BAMresearch/probeye/pull/35
  • copy-issue by @aklawonn in https://github.com/BAMresearch/probeye/pull/36
  • evaluatemodelresponse by @aklawonn in https://github.com/BAMresearch/probeye/pull/37
  • Improvements by @aklawonn in https://github.com/BAMresearch/probeye/pull/38
  • Improve dependency management by @rozsasarpi in https://github.com/BAMresearch/probeye/pull/39
  • code style by @aklawonn in https://github.com/BAMresearch/probeye/pull/50
  • missing probeye.txt by @aklawonn in https://github.com/BAMresearch/probeye/pull/56
  • post-processing by @aklawonn in https://github.com/BAMresearch/probeye/pull/30
  • Refactor run_inference_engines by @TTitscher in https://github.com/BAMresearch/probeye/pull/59
  • Dynesty solver by @TTitscher in https://github.com/BAMresearch/probeye/pull/58
  • Add the truncated normal distribution to the possible priors (https:/… by @DoStrobl in https://github.com/BAMresearch/probeye/pull/62
  • problem definition order by @aklawonn in https://github.com/BAMresearch/probeye/pull/63
  • correlation by @aklawonn in https://github.com/BAMresearch/probeye/pull/53
  • forward model definition by @aklawonn in https://github.com/BAMresearch/probeye/pull/65
  • improve forward model by @aklawonn in https://github.com/BAMresearch/probeye/pull/66
  • Likelihood model definition by @aklawonn in https://github.com/BAMresearch/probeye/pull/67
  • documentation by @aklawonn in https://github.com/BAMresearch/probeye/pull/32
  • Improve general loglikelihood evaluation by @JanKoune in https://github.com/BAMresearch/probeye/pull/71
  • fixed bug in torch-solver by @aklawonn in https://github.com/BAMresearch/probeye/pull/72
  • improve documentation by @aklawonn in https://github.com/BAMresearch/probeye/pull/68
  • tests and domains by @aklawonn in https://github.com/BAMresearch/probeye/pull/74
  • inverse problem by @aklawonn in https://github.com/BAMresearch/probeye/pull/75
  • experiments and sensors by @aklawonn in https://github.com/BAMresearch/probeye/pull/76
  • owlready2 by @aklawonn in https://github.com/BAMresearch/probeye/pull/79
  • remove graph import by @aklawonn in https://github.com/BAMresearch/probeye/pull/81
  • MAP estimator by @aklawonn in https://github.com/BAMresearch/probeye/pull/82
  • Fix emcee sampling out of bounds when bounds are not specified by @JanKoune in https://github.com/BAMresearch/probeye/pull/85
  • parameter's priors by @aklawonn in https://github.com/BAMresearch/probeye/pull/80
  • improve plotting by @aklawonn in https://github.com/BAMresearch/probeye/pull/86
  • update documentation by @aklawonn in https://github.com/BAMresearch/probeye/pull/87
  • solver reproducibility by @aklawonn in https://github.com/BAMresearch/probeye/pull/88
  • forward model arguments by @aklawonn in https://github.com/BAMresearch/probeye/pull/89
  • readme adjustment by @aklawonn in https://github.com/BAMresearch/probeye/pull/92
  • 97 the ci is failing by @danielandresarcones in https://github.com/BAMresearch/probeye/pull/98
  • Update push.yaml to do latest with 3.10 correctly by @joergfunger in https://github.com/BAMresearch/probeye/pull/102
  • 103 output sensor order in forward model by @danielandresarcones in https://github.com/BAMresearch/probeye/pull/104
  • 109 tests are failing update python versions by @joergfunger in https://github.com/BAMresearch/probeye/pull/110
  • 111 importerror cannot import name gaussian from scipysignal by @joergfunger in https://github.com/BAMresearch/probeye/pull/112
  • Embedded bias paper by @danielandresarcones in https://github.com/BAMresearch/probeye/pull/117
  • Fixed parallel and RGMM by @danielandresarcones in https://github.com/BAMresearch/probeye/pull/118
  • Fixed global logprob by @danielandresarcones in https://github.com/BAMresearch/probeye/pull/119
  • Embedded bias initial implementation by @danielandresarcones in https://github.com/BAMresearch/probeye/pull/114

New Contributors

  • @DoStrobl made their first contribution in https://github.com/BAMresearch/probeye/pull/62
  • @JanKoune made their first contribution in https://github.com/BAMresearch/probeye/pull/71
  • @joergfunger made their first contribution in https://github.com/BAMresearch/probeye/pull/102

Full Changelog: https://github.com/BAMresearch/probeye/commits/v1.0.0

- Python
Published by danielandresarcones about 1 year ago