https://github.com/bartongroup/breast_cancer_over_70
Breast cancer data analysis
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 4 DOI reference(s) in README -
○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.5%) to scientific vocabulary
Last synced: 9 months ago
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JSON representation
Repository
Breast cancer data analysis
Basic Info
- Host: GitHub
- Owner: bartongroup
- Language: R
- Default Branch: master
- Size: 15 MB
Statistics
- Stars: 1
- Watchers: 6
- Forks: 0
- Open Issues: 0
- Releases: 0
Created over 6 years ago
· Last pushed almost 4 years ago
https://github.com/bartongroup/Breast_cancer_over_70/blob/master/
# Breast cancer screening over 70
Software used in the manuscrpt "Opting into breast screening over the age of 70 years: seeking evidence to support informed choice", by Savaridas, SL; Gierlinski, M; Quinn, J; Warwick, VR; Evans, AE, [DOI:https://doi.org/10.1016/j.crad.2022.01.057](https://doi.org/10.1016/j.crad.2022.01.057)
## Instructions
Clone the repository to a local disk. Open an R session (we recommend RStudio), make sure you are in the main project directory. First, create a `renv` package environment:
```
install.packages("renv")
renv::restore()
```
This will install all necessady R packages. When this is done, you can run the pipeline to create all figures and data used in the manuscript.
```
targets::tar_make()
```
Finally, you can render the HTML document, reporting all steps of analysis.
```
rmarkdown::render("doc/analysis.Rmd")
```
Owner
- Name: Geoff Barton's Computational Biology Group
- Login: bartongroup
- Kind: organization
- Location: Dundee, Scotland, UK
- Website: https://www.compbio.dundee.ac.uk
- Twitter: bartongrp
- Repositories: 57
- Profile: https://github.com/bartongroup