https://github.com/beatricecornuhewitt/molecularepidemiology_analysiswgs
https://github.com/beatricecornuhewitt/molecularepidemiology_analysiswgs
Science Score: 13.0%
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Low similarity (4.5%) to scientific vocabulary
Last synced: 9 months ago
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Repository
Basic Info
- Host: GitHub
- Owner: BeatriceCornuHewitt
- License: other
- Default Branch: gh-pages
- Homepage: https://aschuerch.github.io/MolecularEpidemiology_AnalysisWGS/
- Size: 7.39 MB
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- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
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Fork of aschuerch/MolecularEpidemiology_AnalysisWGS
Created over 4 years ago
· Last pushed over 4 years ago
https://github.com/BeatriceCornuHewitt/MolecularEpidemiology_AnalysisWGS/blob/gh-pages/
Computer practical for Molecular Epidemiology of Infectious Diseases ============== This lessons are part of a two weeks course directed at MSc and phD students following a non-bioinformatics curriculum. It aims to introduce students to the command line in order to use tools to analyse whole genome sequence data and showcases analyses methods such as SNP calling, pangenome analysis and clustering methods that have been introduced during the lectures. This computer practical uses data from [this publication](https://bmcinfectdis.biomedcentral.com/articles/10.1186/1471-2334-13-110). This lessons are partially based on the [Data Carpentry Genomics lesson](http://www.datacarpentry.org/genomics-workshop/) and are styled with the [Software Carpentry lesson template](https://swcarpentry.github.io/lesson-example/) which are made available under the (Creative Commons Attribution license](https://creativecommons.org/licenses/by/4.0/)
Owner
- Login: BeatriceCornuHewitt
- Kind: user
- Repositories: 1
- Profile: https://github.com/BeatriceCornuHewitt
PhD candidate, environmental epidemiology