https://github.com/beliveau-lab/paintshop_resources
A collection of downloadable resources accompanying the PaintSHOP application.
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (2.7%) to scientific vocabulary
Last synced: 9 months ago
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JSON representation
Repository
A collection of downloadable resources accompanying the PaintSHOP application.
Basic Info
- Host: GitHub
- Owner: beliveau-lab
- License: mit
- Default Branch: master
- Size: 1.82 MB
Statistics
- Stars: 8
- Watchers: 5
- Forks: 1
- Open Issues: 3
- Releases: 3
Created over 6 years ago
· Last pushed over 2 years ago
Metadata Files
Readme
License
README.md
PaintSHOP_resources
A collection of downloadable resources accompanying the PaintSHOP application.
FISH Probe Sets
| Assembly | DNA FISH probes | RNA FISH probes (isoform-resolved) |
RNA FISH probes (isoform-flattened) |
|---|---|---|---|
| hg38 newBalance | download | download | download |
| hg19 newBalance | download | download | download |
| chm13 newBalance | download | download | download |
| mm39 newBalance | download | download | download |
| mm10 newBalance | download | download | download |
| mm9 newBalance | download | download | download |
| dm6 newBalance | download | download | download |
| ce11 newBalance | download | download | download |
| danRer11 newBalance | download | download | download |
| TAIR10 newBalance | download | download | download |
| sacCer3 newBalance | download | download | download |
| rn6 newBalance | download | download | download |
| galGal5 newBalance | download | download | download |
| galGal6 newBalance | download | download | download |
| rheMac10 newBalance | download | download | download |
| xenTro10 newBalance | download | download | download |
| Nfu_20140520 newBalance | download | download | download |
| AaegL5.0 newBalance | download | download | download |
| susScr11 newBalance | download | download | download |
| ASM694v2 newBalance | download | download | download |
| sScyCan1.1 newBalance | download | download | download |
| OligoMiner hg38 balance | download | download | download |
| OligoMiner hg19 balance | download | download | download |
| 2012 oligopaints hg19 | download | download | download |
| iFISH4U 40-mer hg19 | download | download | download |
Appending Sequence Files
| Appending Sequences | Compressed .tsv | Plaintext |
|---|---|---|
| Kishi et al. 2019 Bridges | download | link |
| Mateo et al. 2019 Bridges | download | link |
| Xia et al. 2019 Bridges | download | link |
| MERFISH Bridges | download | link |
| MERFISH Primers | download | link |
| Appending Nomenclature | download | link |
| PaintSHOP Bridges | download | link |
| PaintSHOP Inner Forward Primers | download | link |
| PaintSHOP Inner Reverse Primers | download | link |
| PaintSHOP Outer Forward Primers | download | link |
| PaintSHOP Outer Reverse Primers | download | link |
| SABER 1X Sequences | download | link |
| SABER 2X Sequences | download | link |
Owner
- Name: Beliveau Lab
- Login: beliveau-lab
- Kind: organization
- Website: beliveau.io
- Repositories: 6
- Profile: https://github.com/beliveau-lab
The Beliveau Lab at UW Genome Sciences
GitHub Events
Total
- Watch event: 1
Last Year
- Watch event: 1