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https://github.com/benstemon/ajb-d-22-00147r1

Testing hypotheses of hybrid taxon formation in the shrubby beardtongues (Penstemon subgenus Dasanthera)

https://github.com/benstemon/ajb-d-22-00147r1

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

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    CITATION.cff file
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    codemeta.json file
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    DOI references
    Found 4 DOI reference(s) in README
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    Links to: ncbi.nlm.nih.gov, wiley.com
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    Scientific vocabulary similarity
    Low similarity (4.4%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Testing hypotheses of hybrid taxon formation in the shrubby beardtongues (Penstemon subgenus Dasanthera)

Basic Info
  • Host: GitHub
  • Owner: benstemon
  • Language: Python
  • Default Branch: main
  • Size: 88.6 MB
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Created almost 4 years ago · Last pushed over 3 years ago

https://github.com/benstemon/AJB-D-22-00147R1/blob/main/ 

# Testing hypotheses of hybrid taxon formation in the shrubby beardtongues (*Penstemon* subgenus *Dasanthera*)
This data set corresponds to Stone et al., 2023: "Testing hypotheses of hybrid taxon formation in the shrubby beardtongues (*Penstemon* subgenus *Dasanthera*)". [DOI: 10.1002/ajb2.16118](https://bsapubs.onlinelibrary.wiley.com/doi/full/10.1002/ajb2.16118)

The Dryad repository link is here: https://doi.org/10.5061/dryad.b2rbnzsjr

Access SRA reads associated with this study (PRJNA910207) here: https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA910207

The github repository associated with this project is here: https://github.com/benstemon/AJB-D-22-00147R1


There are seven main subdirectories, each of which contain their own README files:

### [hyde](hyde/)
Data, scripts and output for HyDe analyses (Blischak et al., 2018)

### [making_DFS](making_DFS/)
Data, scripts and output for Dfs analyses (Martin & Amos, 2021)

### [rad_depths](rad_depths/)
Data, scripts and output for RADseq depth and coverage plots

### [running_faststructure](running_faststructure/)
Data, scripts and output for faststructure analyses (Raj et al., 2014)

### [summary_stats](summary_stats/)
Script for producing summary statistics on RADseq data

### [svdq](svdq/)
Data, scripts and output for SVDQuartets analyses (Chifman & Kubatko, 2014)

### [treemix](treemix/)
Data, scripts and output for Treemix analyses (Pickrell & Pritchard, 2012)

Owner

  • Name: Ben Stone
  • Login: benstemon
  • Kind: user

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