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https://github.com/bhklab/tdgea

Time-dependent gene expression Analysis

https://github.com/bhklab/tdgea

Science Score: 13.0%

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Last synced: 10 months ago · JSON representation

Repository

Time-dependent gene expression Analysis

Basic Info
  • Host: GitHub
  • Owner: bhklab
  • Language: R
  • Default Branch: master
  • Size: 52.9 MB
Statistics
  • Stars: 0
  • Watchers: 3
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created over 9 years ago · Last pushed over 9 years ago
Metadata Files
Readme

README.md

Time-dependent gene expression Analysis (TDGEA)

These scripts analyze Affymetrix microarray data to look at relationships between time and expression levels.

Running the Analysis

Generally follows this procedure:

  1. Open R

  2. Set working directory as src

  3. Load data with source("data/load_meta.R");

  4. Analyze data using a script of choice in the analysis folder

  5. Load plotting functions with source("visualization/plotting_functions.R");

  6. Create plots with a corresponding script in the visualization folder

Owner

  • Name: BHKLAB
  • Login: bhklab
  • Kind: organization
  • Location: Toronto, Ontario, Canada

The Haibe-Kains Laboratory @ Princess Margaret Cancer Centre

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Last synced: about 1 year ago

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  • Total Commits: 73
  • Total Committers: 3
  • Avg Commits per committer: 24.333
  • Development Distribution Score (DDS): 0.027
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  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
James Hawley j****y@g****m 71
James Hawley j****y 1
Benjamin Haibe-Kains b****a@g****m 1

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Past Year
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