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Recent Releases of https://github.com/bids-apps/freesurfer

https://github.com/bids-apps/freesurfer - 202309

What's Changed

  • Update deployment and add version notice by @Shotgunosine in https://github.com/bids-apps/freesurfer/pull/77
  • [MAINT] deploy on all push to main by @Remi-Gau in https://github.com/bids-apps/freesurfer/pull/79

Full Changelog: https://github.com/bids-apps/freesurfer/compare/v7.4.1...202309

- Python
Published by Remi-Gau over 2 years ago

https://github.com/bids-apps/freesurfer - v7.4.1

What's Changed

  • WIP: Add Freesurfer 7 by @Shotgunosine in https://github.com/bids-apps/freesurfer/pull/67

New Contributors

  • @Remi-Gau made their first contribution in https://github.com/bids-apps/freesurfer/pull/73

Full Changelog: https://github.com/bids-apps/freesurfer/compare/v6.0.1-6.1...v7.4.1

- Python
Published by Remi-Gau over 2 years ago

https://github.com/bids-apps/freesurfer - new docker build

The config.yml was adapted to reflect changes in the docker login command (#63).

- Python
Published by PeerHerholz over 5 years ago

https://github.com/bids-apps/freesurfer - v6.0.1-5

  • added support for the 3T flag (https://github.com/BIDS-Apps/freesurfer/pull/42)

- Python
Published by chrisgorgo over 7 years ago

https://github.com/bids-apps/freesurfer - v6.0.1-4

  • remove -parallel flag to improve stability (https://github.com/BIDS-Apps/freesurfer/pull/41)

- Python
Published by chrisgorgo almost 8 years ago

https://github.com/bids-apps/freesurfer - v6.0.1-3

  • Added Euler number extraction.

- Python
Published by chrisgorgo about 8 years ago

https://github.com/bids-apps/freesurfer - v6.0.1-2

  • added ability to skip the validator or pick a new config file for it

- Python
Published by chrisgorgo over 8 years ago

https://github.com/bids-apps/freesurfer - v6.0.1-1

  • more robust handling of interrupted execution
  • updated FreeSurfer to 6.0.1

- Python
Published by chrisgorgo over 8 years ago

https://github.com/bids-apps/freesurfer - v6.0.0-5

Step decomposition in longitunal studies

- Python
Published by chrisgorgo over 8 years ago

https://github.com/bids-apps/freesurfer - v6.0.0-4

Fixed group level template creation.

- Python
Published by chrisgorgo over 8 years ago

https://github.com/bids-apps/freesurfer - v6.0.0-3

  • skip subjects with missing data instead of crashing

- Python
Published by chrisgorgo almost 9 years ago

https://github.com/bids-apps/freesurfer - v6.0.0-2

  • Added acq_labels for the T2/Flair
  • Longitudinal fixes
  • Added group2 level for stats files export

- Python
Published by chrisgorgo about 9 years ago

https://github.com/bids-apps/freesurfer - v6.0.0-1

  • Updated FreeSurfer to 6.0.0
  • Added support for the -hires option
  • Enabled -parallel mode

- Python
Published by chrisgorgo about 9 years ago

https://github.com/bids-apps/freesurfer - v5.3.0HCP-11

  • Improvements to the longitudinal stream
  • More control over usage of T2 images
  • Better support for restarting interrupted runs

- Python
Published by chrisgorgo about 9 years ago

https://github.com/bids-apps/freesurfer -

  • added a workaround for absolute paths
  • skip group level if only one participant is included

- Python
Published by chrisgorgo about 9 years ago

https://github.com/bids-apps/freesurfer -

  • updated bids-validator and node.js
  • added support for using T2 volumes
  • added support for using T1 volumes with only a particular acquisition label

- Python
Published by chrisgorgo about 9 years ago

https://github.com/bids-apps/freesurfer -

Further attempts to avoid race conditions when copying fsaverage folder.

- Python
Published by chrisgorgo about 9 years ago

https://github.com/bids-apps/freesurfer -

  • improved fsaverage copying to avoid race conditions

- Python
Published by chrisgorgo over 9 years ago

https://github.com/bids-apps/freesurfer -

  • updated test data location

- Python
Published by chrisgorgo over 9 years ago

https://github.com/bids-apps/freesurfer -

  • Override PYTHONPATH to avoid confusing packages from outside and inside of a container (applies only to singualrity)

- Python
Published by chrisgorgo over 9 years ago

https://github.com/bids-apps/freesurfer -

  • Added support for specifying which autorecon stages should be run
  • Added real tests (limited to autorecon1)

- Python
Published by chrisgorgo over 9 years ago