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Recent Releases of https://github.com/bigbio/pmultiqc

https://github.com/bigbio/pmultiqc - v0.0.33 - Major release with bug fixing and service creation

What's Changed

  • major changes in index.html by @ypriverol in https://github.com/bigbio/pmultiqc/pull/269
  • feat: GitHub action to push images by @selvaebi in https://github.com/bigbio/pmultiqc/pull/268
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/270
  • support SDRF for DIA-NN by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/272
  • Update DIANN support for SDRF. by @ypriverol in https://github.com/bigbio/pmultiqc/pull/273
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/275
  • support quant table for DIA-NN and MaxQuant by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/280
  • Better Docker Service, handling errors by @ypriverol in https://github.com/bigbio/pmultiqc/pull/279
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/281
  • minor changes by @ypriverol in https://github.com/bigbio/pmultiqc/pull/282
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/283
  • fix bugs and optimize read_mzid by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/285
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/286
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/287
  • fix bugs and add features for mzid by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/291
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/292
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/293

New Contributors

  • @selvaebi made their first contribution in https://github.com/bigbio/pmultiqc/pull/268

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.32...v0.0.33

- Python
Published by ypriverol 11 months ago

https://github.com/bigbio/pmultiqc - v0.0.32

What's Changed

  • major changes to add service by @ypriverol in https://github.com/bigbio/pmultiqc/pull/251
  • minor changes web by @ypriverol in https://github.com/bigbio/pmultiqc/pull/253
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/254
  • Update to the service by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/256
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/257
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/258
  • adding information about the service. by @ypriverol in https://github.com/bigbio/pmultiqc/pull/260
  • SSL proteobench updated by @ypriverol in https://github.com/bigbio/pmultiqc/pull/261
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/262
  • fix for MaxQuant and DIA-NN by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/264
  • Major Bug fixing for MAxQuant and DIANN datasets in PRIDE by @ypriverol in https://github.com/bigbio/pmultiqc/pull/265
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/266

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.31...v0.0.32

- Python
Published by ypriverol 11 months ago

https://github.com/bigbio/pmultiqc - v0.0.31

What's Changed

  • 🔧 see if Python 3.13 works by @enryH in https://github.com/bigbio/pmultiqc/pull/244
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/245
  • Fix github actions by @ypriverol in https://github.com/bigbio/pmultiqc/pull/246
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/248

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.30...v0.0.31

- Python
Published by ypriverol 12 months ago

https://github.com/bigbio/pmultiqc - v0.0.30

What's Changed

  • [Fix] the issue in MaxQuant by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/228
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/229
  • [Fix] avoid NaN conversion by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/232
  • Bug fix with NaN handling issue #231 by @ypriverol in https://github.com/bigbio/pmultiqc/pull/233
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/234
  • add support for DIA-NN report.parquet by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/236
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/237
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/238
  • add support for quantms DIA-NN 2.0 by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/240
  • refactoring of multiple plugin pmultiqc by @ypriverol in https://github.com/bigbio/pmultiqc/pull/241
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/242

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.29...v0.0.30

- Python
Published by ypriverol 12 months ago

https://github.com/bigbio/pmultiqc - v0.0.29

What's Changed

  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/170
  • add DIANN results by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/172
  • Fix code by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/174
  • Added the examples for DIANN by @ypriverol in https://github.com/bigbio/pmultiqc/pull/173
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/175
  • update README by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/177
  • update README to support DIANN by @ypriverol in https://github.com/bigbio/pmultiqc/pull/178
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/179
  • Update by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/181
  • Major updates in dependencies and plots structure and sections by @ypriverol in https://github.com/bigbio/pmultiqc/pull/182
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/183
  • Add some plots for the quantms results by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/185
  • major refactoring by @ypriverol in https://github.com/bigbio/pmultiqc/pull/186
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/187
  • Add some plots by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/189
  • including new plots by @ypriverol in https://github.com/bigbio/pmultiqc/pull/190
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/191
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/192
  • Support ProteoBench by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/194
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/195
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/196
  • Optimizing code and adding a plot by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/198
  • Fix Bug by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/200
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/199
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/201
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/202
  • :bug: use metadata module and order imports by @enryH in https://github.com/bigbio/pmultiqc/pull/206
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/208
  • Fix bugs and add some plots for ProteoBench by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/211
  • major changes related to ProteoBench by @ypriverol in https://github.com/bigbio/pmultiqc/pull/212
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/213
  • Code refactoring by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/216
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/217
  • Dependency check and code optimization by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/219
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/220
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/221
  • Added several plots for DIA and DIA-NN. by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/223
  • DIANN extended with more plots by @ypriverol in https://github.com/bigbio/pmultiqc/pull/224
  • Auto-update examples by @github-actions[bot] in https://github.com/bigbio/pmultiqc/pull/225

New Contributors

  • @enryH made their first contribution in https://github.com/bigbio/pmultiqc/pull/206

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.28...v0.0.29

- Python
Published by ypriverol about 1 year ago

https://github.com/bigbio/pmultiqc - v0.0.28

What's Changed

  • [Fix] DIA by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/167
  • fix bug in DIA with diann_report.tsv by @ypriverol in https://github.com/bigbio/pmultiqc/pull/168
  • increase version 0.0.28 by @ypriverol in https://github.com/bigbio/pmultiqc/pull/169

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.27...v0.0.28

- Python
Published by ypriverol about 1 year ago

https://github.com/bigbio/pmultiqc - v0.0.27

What's Changed

  • Fix some issues by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/153
  • [Fix] Delta Mass by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/155
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/152
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/156
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/157
  • Add MaxQuant HeatMap and refine code by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/159
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/160
  • [Fix] DIA mzTab by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/162
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/163
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/164

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.26...v0.0.27

- Python
Published by ypriverol about 1 year ago

https://github.com/bigbio/pmultiqc - v0.0.26

What's Changed

  • Add mzid plugin by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/102
  • multiqc 1.23 -> 1.26 by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/106
  • MaxQuant support based on PTXQC by @ypriverol in https://github.com/bigbio/pmultiqc/pull/107
  • Fix the code by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/108
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/109
  • maxquant tests added by @ypriverol in https://github.com/bigbio/pmultiqc/pull/110
  • add automatic updates for examples by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/112
  • remove unnecesary tests by @ypriverol in https://github.com/bigbio/pmultiqc/pull/111
  • [Fix] quantms results by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/113
  • Major changes in the pmultiqc, support for MQ by @ypriverol in https://github.com/bigbio/pmultiqc/pull/114
  • chore(docs): auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/115
  • Example with New QuantMS Dataset by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/117
  • Update CI/CD by @ypriverol in https://github.com/bigbio/pmultiqc/pull/118
  • clean code. by @ypriverol in https://github.com/bigbio/pmultiqc/pull/119
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/120
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/121
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/122
  • CI/CD updated. by @ypriverol in https://github.com/bigbio/pmultiqc/pull/123
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/124
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/125
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/126
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/127
  • Fix some bugs by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/129
  • Fix the experimental design plot by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/131
  • major changes and bug fixing. by @ypriverol in https://github.com/bigbio/pmultiqc/pull/130
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/133
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/134
  • Improvements in some of the plots Help. by @ypriverol in https://github.com/bigbio/pmultiqc/pull/136
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/137
  • minor changes in the comments by @ypriverol in https://github.com/bigbio/pmultiqc/pull/138
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/139
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/140
  • [Fix] pipeline result statistics plot by @yueqixuan in https://github.com/bigbio/pmultiqc/pull/142
  • Dev by @ypriverol in https://github.com/bigbio/pmultiqc/pull/143
  • other comments by @ypriverol in https://github.com/bigbio/pmultiqc/pull/144
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/145
  • increase version by @ypriverol in https://github.com/bigbio/pmultiqc/pull/148
  • Auto-update examples by @github-actions in https://github.com/bigbio/pmultiqc/pull/149

New Contributors

  • @yueqixuan made their first contribution in https://github.com/bigbio/pmultiqc/pull/102
  • @github-actions made their first contribution in https://github.com/bigbio/pmultiqc/pull/115

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.25...v0.0.26

- Python
Published by ypriverol about 1 year ago

https://github.com/bigbio/pmultiqc - v0.0.25

What's Changed

  • First update multiqc 1.23 by @daichengxin in https://github.com/bigbio/pmultiqc/pull/99
  • change from csv -> parquet @ypriverol in https://github.com/bigbio/pmultiqc/pull/97
  • Small changes in the structure.
  • Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.24...v0.0.25

- Python
Published by ypriverol almost 2 years ago

https://github.com/bigbio/pmultiqc - Prerelease v0.0.24

What's Changed

  • Improved README.md by @daichengxin in https://github.com/bigbio/pmultiqc/pull/91
  • Prevent NoneType from intensity frame by @WangHong007 in https://github.com/bigbio/pmultiqc/pull/94
  • specify multiqc version by @daichengxin in https://github.com/bigbio/pmultiqc/pull/95

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.23...v0.0.24

- Python
Published by ypriverol over 2 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.23

What's Changed

  • support .d and disable beeswarm by @daichengxin in https://github.com/bigbio/pmultiqc/pull/90

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.22...v0.0.23

- Python
Published by ypriverol over 2 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.22

What's Changed

  • Enable Sage search engine scores by @WangHong007 in https://github.com/bigbio/pmultiqc/pull/87

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.21...v0.0.22

- Python
Published by ypriverol almost 3 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.21

What's Changed

  • add ignore idxml option by @daichengxin in https://github.com/bigbio/pmultiqc/pull/86

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.20...v0.0.21

- Python
Published by ypriverol almost 3 years ago

https://github.com/bigbio/pmultiqc - Release v0.0.20

What's Changed

  • Fixed Bugs by @daichengxin in https://github.com/bigbio/pmultiqc/pull/84

Full Changelog: https://github.com/bigbio/pmultiqc/compare/v0.0.19...v0.0.20

- Python
Published by ypriverol almost 3 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.19

- Python
Published by ypriverol over 3 years ago

https://github.com/bigbio/pmultiqc - Prerelease 0.0.18

- Python
Published by ypriverol over 3 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.17

Support for DIA MS2 and bug fixed.

- Python
Published by ypriverol over 3 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.16

- Python
Published by ypriverol almost 4 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.15

- Python
Published by ypriverol almost 4 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.14

- Python
Published by ypriverol almost 4 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.13

In this pre-release some major changes are included:

  • [x] Support for DIA-NN data analysis.
  • [x] Support for search engine scores.
  • [x] Support for peptide/protein quantification tables for spectral counting analysis.

- Python
Published by ypriverol almost 4 years ago

https://github.com/bigbio/pmultiqc - Release 0.0.12

- Python
Published by ypriverol about 4 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.11

- Python
Published by ypriverol over 4 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.10

Pre release

- Python
Published by ypriverol over 4 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.9

- Python
Published by ypriverol over 4 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.8

- Python
Published by ypriverol over 4 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.7

- Python
Published by ypriverol almost 5 years ago

https://github.com/bigbio/pmultiqc - Pre-release v0.0.5

- Python
Published by ypriverol about 5 years ago

https://github.com/bigbio/pmultiqc - Prerelease v0.0.4

- Python
Published by ypriverol about 5 years ago

https://github.com/bigbio/pmultiqc - Prerelease v0.0.3

- Python
Published by ypriverol about 5 years ago

https://github.com/bigbio/pmultiqc - v0.0.2

Prerelease v0.0.2 of pmultiqc

- Python
Published by ypriverol about 5 years ago