https://github.com/bigbuildbench/mosquito_aiofile

https://github.com/bigbuildbench/mosquito_aiofile

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  • Host: GitHub
  • Owner: BigBuildBench
  • License: other
  • Language: Python
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Created over 1 year ago · Last pushed over 1 year ago
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Readme

README.md

AIOFile

Github Actions Latest Version Wheel Python Versions License Coverage Status

Real asynchronous file operations with asyncio support.

Status

Development - Stable

Features

  • Since version 2.0.0 using caio, which contains linux libaio and two thread-based implementations (c-based and pure-python).
  • AIOFile has no internal pointer. You should pass offset and chunk_size for each operation or use helpers (Reader or Writer). The simplest way is to use async_open for creating object with file-like interface.
  • For Linux using implementation based on libaio.
  • For POSIX (MacOS X and optional Linux) using implementation based on threadpool.
  • Otherwise using pure-python thread-based implementation.
  • Implementation chooses automatically depending on system compatibility.

Limitations

  • Linux native AIO implementation is not able to open special files. Asynchronous operations against special fs like /proc/ /sys/ are not supported by the kernel. It's not a aiofile's or caio issue. In these cases, you might switch to thread-based implementations (see Troubleshooting section). However, when used on supported file systems, the linux implementation has a smaller overhead and is preferred but it's not a silver bullet.

Code examples

All code examples require Python 3.6+.

High-level API

async_open helper

Helper mimics python file-like objects, it returns file-like objects with similar but async methods.

Supported methods:

  • async def read(length = -1) - reading chunk from file, when length is -1, will be reading file to the end.
  • async def write(data) - writing chunk to file
  • def seek(offset) - setting file pointer position
  • def tell() - returns current file pointer position
  • async def readline(size=-1, newline="\n") - read chunks until newline or EOF. Since version 3.7.0 __aiter__ returns LineReader.

This method is suboptimal for small lines because it doesn't reuse read buffer. When you want to read file by lines please avoid using async_open use LineReader instead. * def __aiter__() -> LineReader - iterator over lines. * def iter_chunked(chunk_size: int = 32768) -> Reader - iterator over chunks. * .file property contains AIOFile object

Basic example:

```python import asyncio from pathlib import Path from tempfile import gettempdir

from aiofile import async_open

tmp_filename = Path(gettempdir()) / "hello.txt"

async def main(): async with asyncopen(tmpfilename, 'w+') as afp: await afp.write("Hello ") await afp.write("world") afp.seek(0)

    print(await afp.read())

    await afp.write("Hello from\nasync world")
    print(await afp.readline())
    print(await afp.readline())

asyncio.run(main()) ```

Example without context manager:

```python import asyncio import atexit import os from tempfile import mktemp

from aiofile import async_open

TMPNAME = mktemp() atexit.register(os.unlink, TMPNAME)

async def main(): afp = await asyncopen(TMPNAME, "w") await afp.write("Hello") await afp.close()

asyncio.run(main()) assert open(TMP_NAME, "r").read() == "Hello" ```

Concatenate example program (cat):

```python import asyncio import sys from argparse import ArgumentParser from pathlib import Path

from aiofile import async_open

parser = ArgumentParser( description="Read files line by line using asynchronous io API" ) parser.addargument("filename", nargs="+", type=Path)

async def main(arguments): for src in arguments.filename: async with asyncopen(src, "r") as afp: async for line in afp: sys.stdout.write(line)

asyncio.run(main(parser.parse_args())) ```

Copy file example program (cp):

```python import asyncio from argparse import ArgumentParser from pathlib import Path

from aiofile import async_open

parser = ArgumentParser( description="Copying files using asynchronous io API" ) parser.addargument("source", type=Path) parser.addargument("dest", type=Path) parser.add_argument("--chunk-size", type=int, default=65535)

async def main(arguments): async with asyncopen(arguments.source, "rb") as src, \ asyncopen(arguments.dest, "wb") as dest: async for chunk in src.iterchunked(arguments.chunksize): await dest.write(chunk)

asyncio.run(main(parser.parse_args())) ```

Example with opening already open file pointer:

```python import asyncio from typing import IO, Any from aiofile import async_open

async def main(fp: IO[Any]): async with async_open(fp) as afp: await afp.write("Hello from\nasync world") print(await afp.readline())

with open("test.txt", "w+") as fp: asyncio.run(main(fp)) ```

Linux native aio doesn't support reading and writing special files (e.g. procfs/sysfs/unix pipes/etc.), so you can perform operations with these files using compatible context objects.

```python import asyncio from aiofile import asyncopen from caio import threadaio_asyncio from contextlib import AsyncExitStack

async def main(): async with AsyncExitStack() as stack:

    # Custom context should be reused
    ctx = await stack.enter_async_context(
        thread_aio_asyncio.AsyncioContext()
    )

    # Open special file with custom context
    src = await stack.enter_async_context(
        async_open("/proc/cpuinfo", "r", context=ctx)
    )

    # Open regular file with default context
    dest = await stack.enter_async_context(
        async_open("/tmp/cpuinfo", "w")
    )

    # Copying file content line by line
    async for line in src:
        await dest.write(line)

asyncio.run(main()) ```

Low-level API

The AIOFile class is a low-level interface for asynchronous file operations, and the read and write methods accept an offset=0 in bytes at which the operation will be performed.

This allows you to do many independent IO operations on a once open file without moving the virtual carriage.

For example, you may make 10 concurrent HTTP requests by specifying the Range header, and asynchronously write one opened file, while the offsets must either be calculated manually, or use 10 instances of Writer with specified initial offsets.

In order to provide sequential reading and writing, there is Writer, Reader and LineReader. Keep in mind async_open is not the same as AIOFile, it provides a similar interface for file operations, it simulates methods like read or write as it is implemented in the built-in open.

```python import asyncio from aiofile import AIOFile

async def main(): async with AIOFile("hello.txt", 'w+') as afp: payload = "Hello world\n"

    await asyncio.gather(
        *[afp.write(payload, offset=i * len(payload)) for i in range(10)]
    )

    await afp.fsync()

    assert await afp.read(len(payload) * 10) == payload * 10

asyncio.run(main()) ```

The Low-level API in fact is just little bit sugared caio API.

```python import asyncio from aiofile import AIOFile

async def main(): async with AIOFile("/tmp/hello.txt", 'w+') as afp: await afp.write("Hello ") await afp.write("world", offset=7) await afp.fsync()

    print(await afp.read())

asyncio.run(main()) ```

Reader and Writer

When you want to read or write file linearly following example might be helpful.

```python import asyncio from aiofile import AIOFile, Reader, Writer

async def main(): async with AIOFile("/tmp/hello.txt", 'w+') as afp: writer = Writer(afp) reader = Reader(afp, chunk_size=8)

    await writer("Hello")
    await writer(" ")
    await writer("World")
    await afp.fsync()

    async for chunk in reader:
        print(chunk)

asyncio.run(main()) ```

LineReader - read file line by line

LineReader is a helper that is very effective when you want to read a file linearly and line by line.

It contains a buffer and will read the fragments of the file chunk by chunk into the buffer, where it will try to find lines.

The default chunk size is 4KB.

```python import asyncio from aiofile import AIOFile, LineReader, Writer

async def main(): async with AIOFile("/tmp/hello.txt", 'w+') as afp: writer = Writer(afp)

    await writer("Hello")
    await writer(" ")
    await writer("World")
    await writer("\n")
    await writer("\n")
    await writer("From async world")
    await afp.fsync()

    async for line in LineReader(afp):
        print(line)

asyncio.run(main()) ```

When you want to read file by lines please avoid to use async_open use LineReader instead.

More examples

Useful examples with aiofile

Async CSV Dict Reader

```python import asyncio import io from csv import DictReader

from aiofile import AIOFile, LineReader

class AsyncDictReader: def init(self, afp, *kwargs): self.buffer = io.BytesIO() self.filereader = LineReader( afp, linesep=kwargs.pop('linesep', '\n'), chunksize=kwargs.pop('chunk_size', 4096), offset=kwargs.pop('offset', 0), ) self.reader = DictReader( io.TextIOWrapper( self.buffer, encoding=kwargs.pop('encoding', 'utf-8'), errors=kwargs.pop('errors', 'replace'), ), *kwargs, ) self.line_num = 0

def __aiter__(self):
    return self

async def __anext__(self):
    if self.line_num == 0:
        header = await self.file_reader.readline()
        self.buffer.write(header)

    line = await self.file_reader.readline()

    if not line:
        raise StopAsyncIteration

    self.buffer.write(line)
    self.buffer.seek(0)

    try:
        result = next(self.reader)
    except StopIteration as e:
        raise StopAsyncIteration from e

    self.buffer.seek(0)
    self.buffer.truncate(0)
    self.line_num = self.reader.line_num

    return result

async def main(): async with AIOFile('sample.csv', 'rb') as afp: async for item in AsyncDictReader(afp): print(item)

asyncio.run(main()) ```

Troubleshooting

The caio linux implementation works normal for modern linux kernel versions and file systems. So you may have problems specific for your environment. It's not a bug and might be resolved some ways:

  1. Upgrade the kernel
  2. Use compatible file systems
  3. Use threads based or pure python implementation.

The caio since version 0.7.0 contains some ways to do this.

  1. In runtime use the environment variable CAIO_IMPL with possible values:
* `linux` - use native linux kernels aio mechanism
* `thread` - use thread based implementation written in C
* `python` - use pure python implementation
  1. File default_implementation located near __init__.py in caio installation path. It's useful for distros package maintainers. This file might contains comments (lines starts with # symbol) and the first line should be one of linux thread or python.

  2. You might manually manage contexts:

```python import asyncio

from aiofile import asyncopen from caio import linuxaioasyncio, threadaio_asyncio

async def main(): linuxctx = linuxaioasyncio.AsyncioContext() threadsctx = threadaioasyncio.AsyncioContext()

async with async_open("/tmp/test.txt", "w", context=linux_ctx) as afp:
    await afp.write("Hello")

async with async_open("/tmp/test.txt", "r", context=threads_ctx) as afp:
    print(await afp.read())

asyncio.run(main()) ```

Owner

  • Name: BigBuildBench
  • Login: BigBuildBench
  • Kind: organization

abbr. B3, benchmarking the repo-level understanding capability of your LLMs by reconstructing project build-file.

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Dependencies

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  • actions/checkout v4 composite
  • actions/setup-python v5 composite
  • coverallsapp/github-action master composite
pyproject.toml pypi
  • aiomisc-pytest ^1.2.1 develop
  • coveralls <4 develop
  • markdown-pytest ^0.3.2 develop
  • mypy ^1.11.2 develop
  • pylama ^8.4.1 develop
  • pytest >=8.2.0,<8.3.0 develop
  • pytest-cov ^5.0.0 develop
  • setuptools ^75.1.0 develop
  • python >=3.8,<4