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flowprocessing

Flow Processing Tool (Matlab) for 4D flow MRI data

https://github.com/schrau24/flowprocessing

Science Score: 57.0%

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    CITATION.cff file
    Found CITATION.cff file
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    Found .zenodo.json file
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    Found 1 DOI reference(s) in README
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    Academic publication links
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    Scientific vocabulary similarity
    Low similarity (10.4%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Flow Processing Tool (Matlab) for 4D flow MRI data

Basic Info
  • Host: GitHub
  • Owner: schrau24
  • License: other
  • Language: MATLAB
  • Default Branch: main
  • Homepage:
  • Size: 23.2 MB
Statistics
  • Stars: 4
  • Watchers: 1
  • Forks: 1
  • Open Issues: 1
  • Releases: 0
Created almost 3 years ago · Last pushed 6 months ago
Metadata Files
Readme License Citation

README.md

Amsterdam UMC Flow Processing Tool

a Matlab-based app for all-in-one 4D flow MRI processing, measurements, and visualizations

This tool is based off a previously published post-processing software. Use of this tool should be associated and cited with the following reference:\ E. Schrauben, A. Wåhlin, K. Ambarki, E. Spaak, J. Malm, O. Wieben, A. Eklund. “Fast 4D flow MRI intracranial segmentation and quantification in tortuous arteries.” JMRI 2015, doi: 10.1002/jmri.24900.

Installation: This tool is built using Matlab's appdesigner functionality. It was built using Matlab version 2021a; it is therefore recommended to use this version or newer for running this tool. Download and unzip the files. All functionality is built into FlowProcessing.m file and the corresponding utilities/subfolder.

Additionally, the use of this software requires the following Matlab toolboxes: - Signal Processing Toolbox - Image Processing Toolbox - Statistics and Machine Learning Toolbox - Computer Vision Toolbox

Data needed: 4D flow data from different vendors and of different types are possible to load into the tool. See the corresponding section in the FlowProcessing User Manual

Getting Started: Within Matlab, navigate to the folder containing FlowProcessing.m. Type this into your command window: FlowProcessing

User manual: For full explanation of the tool functionality, please refer to the markdown FlowProcessing User Manual

Owner

  • Name: Eric Schrauben
  • Login: schrau24
  • Kind: user
  • Location: Amsterdam, Netherlands
  • Company: Amsterdam UMC

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Schrauben"
  given-names: "Eric"
  orcid: "https://orcid.org/0000-0002-7922-3615"
title: "Amsterdam UMC FlowProcessingTool"
version: 2.0
date-released: 2025-05-22
url: https://github.com/schrau24/FlowProcessing"

GitHub Events

Total
  • Issues event: 2
  • Watch event: 2
  • Issue comment event: 5
  • Member event: 1
  • Push event: 29
  • Create event: 2
Last Year
  • Issues event: 2
  • Watch event: 2
  • Issue comment event: 5
  • Member event: 1
  • Push event: 29
  • Create event: 2