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https://github.com/bihealth/cubi-isa-templates

CUBI ISA-Tab templates

https://github.com/bihealth/cubi-isa-templates

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
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    DOI references
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    Academic publication links
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    Institutional organization owner
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    JOSS paper metadata
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    Scientific vocabulary similarity
    Low similarity (5.0%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

CUBI ISA-Tab templates

Basic Info
  • Host: GitHub
  • Owner: bihealth
  • License: mit
  • Language: Python
  • Default Branch: main
  • Size: 101 KB
Statistics
  • Stars: 2
  • Watchers: 9
  • Forks: 4
  • Open Issues: 9
  • Releases: 3
Created about 3 years ago · Last pushed about 2 years ago
Metadata Files
Readme Changelog License

README.md

CUBI ISA-Tab Templates

tests MIT License Code style

This repository contains Cookiecutter-based ISA-Tab templates used at CUBI.

Example of simple usage:

```py from cookiecutter.main import cookiecutter from cubiisatemplates import TEMPLATES

isatpl = TEMPLATES["singlecellrnaseq"] extracontext = {"_outputdir": "templatedir"} cookiecutter( template=isatpl.path, extracontext=extracontext, outputdir="/template/path/", noinput=True ) ```

For proper command line usage, see cubi-tk.

Owner

  • Name: Berlin Institute of Health
  • Login: bihealth
  • Kind: organization

BIH Core Unit Bioinformatics & BIH HPC IT

GitHub Events

Total
Last Year

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 13
  • Total pull requests: 25
  • Average time to close issues: about 1 month
  • Average time to close pull requests: 10 days
  • Total issue authors: 3
  • Total pull request authors: 2
  • Average comments per issue: 0.38
  • Average comments per pull request: 0.4
  • Merged pull requests: 21
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 0.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • mikkonie (6)
  • sellth (6)
  • Nicolai-vKuegelgen (1)
Pull Request Authors
  • sellth (23)
  • mikkonie (2)
Top Labels
Issue Labels
bug (4) feature (3)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 1,103 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 3
  • Total maintainers: 1
pypi.org: cubi-isa-templates

CUBI ISA-Tab templates

  • Versions: 3
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 1,103 Last month
Rankings
Dependent packages count: 10.1%
Downloads: 11.3%
Average: 18.7%
Dependent repos count: 21.5%
Forks count: 22.6%
Stargazers count: 27.8%
Maintainers (1)
sellth
Last synced: 10 months ago