https://github.com/bio-lan/nf-scrna
Pipeline for Single-cell RNA Seq
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 4 DOI reference(s) in README -
○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (8.1%) to scientific vocabulary
Last synced: 6 months ago
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Pipeline for Single-cell RNA Seq
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Fork of singleron-RD/scrna
Created almost 2 years ago
· Last pushed almost 2 years ago
https://github.com/Bio-Lan/nf-scrna/blob/master/
## Introduction **singleron-RD/scrna** is a bioinformatics pipeline for processing single-cell RNA-seq data. It is designed for analysis of data generated by the Singleron GEXSCOPE kit, but can be adapted to analyze single-cell RNAseq data from other platforms. ## Documents - [Usage](./docs/usage.md) - [Modules](./docs/modules.md) - [Parameters](./docs/parameters.md) ## Contributions and Support If you would like to contribute to this pipeline, please see the [contributing guidelines](.github/CONTRIBUTING.md). ## Citations An extensive list of references for the tools used by the pipeline can be found in the [`CITATIONS.md`](CITATIONS.md) file. This pipeline uses code and infrastructure developed and maintained by the [nf-core](https://nf-co.re) community, reused here under the [MIT license](https://github.com/nf-core/tools/blob/master/LICENSE). > **The nf-core framework for community-curated bioinformatics pipelines.** > > Philip Ewels, Alexander Peltzer, Sven Fillinger, Harshil Patel, Johannes Alneberg, Andreas Wilm, Maxime Ulysse Garcia, Paolo Di Tommaso & Sven Nahnsen. > > _Nat Biotechnol._ 2020 Feb 13. doi: [10.1038/s41587-020-0439-x](https://dx.doi.org/10.1038/s41587-020-0439-x).
Owner
- Name: Lan
- Login: Bio-Lan
- Kind: user
- Location: NanJing
- Company: Singleron
- Repositories: 1
- Profile: https://github.com/Bio-Lan
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