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Open Source Science

https://github.com/bioconductor/ucsc.utils

Low-level utilities to retrieve data from the UCSC Genome Browser

https://github.com/bioconductor/ucsc.utils

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (5.3%) to scientific vocabulary

Keywords

bioconductor-package core-package
Last synced: 6 months ago · JSON representation

Repository

Low-level utilities to retrieve data from the UCSC Genome Browser

Basic Info
  • Host: GitHub
  • Owner: Bioconductor
  • Language: R
  • Default Branch: devel
  • Homepage:
  • Size: 98.6 KB
Statistics
  • Stars: 1
  • Watchers: 9
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Topics
bioconductor-package core-package
Created almost 2 years ago · Last pushed 10 months ago
Metadata Files
Readme Changelog

README.md

UCSC.utils is an R/Bioconductor package that provides a set of low-level utilities to retrieve data from the UCSC Genome Browser.

See https://bioconductor.org/packages/UCSC.utils for more information including how to install the release version of the package (please refrain from installing directly from GitHub).

Owner

  • Name: Bioconductor
  • Login: Bioconductor
  • Kind: organization

Software for the analysis and comprehension of high-throughput genomic data

GitHub Events

Total
  • Push event: 7
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Last Year
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  • Create event: 2

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Last synced: 6 months ago

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Past Year
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Dependencies

DESCRIPTION cran
  • S4Vectors * imports
  • httr * imports
  • methods * imports
  • rjson * imports
  • BiocStyle * suggests
  • DBI * suggests
  • RMariaDB * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests
.github/workflows/check-bioc.yml actions
  • JamesIves/github-pages-deploy-action releases/v4 composite
  • actions/cache v3 composite
  • actions/checkout v3 composite
  • actions/upload-artifact master composite
  • docker/build-push-action v4 composite
  • docker/login-action v2 composite
  • docker/setup-buildx-action v2 composite
  • docker/setup-qemu-action v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite