https://github.com/bioconductor/hdf5array
HDF5 datasets as array-like objects in R
Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.4%) to scientific vocabulary
Keywords
bioconductor-package
core-package
u24ca289073
Last synced: 6 months ago
·
JSON representation
Repository
HDF5 datasets as array-like objects in R
Basic Info
- Host: GitHub
- Owner: Bioconductor
- Language: R
- Default Branch: devel
- Homepage: https://bioconductor.github.io/HDF5Array/
- Size: 8.69 MB
Statistics
- Stars: 12
- Watchers: 17
- Forks: 15
- Open Issues: 6
- Releases: 0
Topics
bioconductor-package
core-package
u24ca289073
Created over 8 years ago
· Last pushed 6 months ago
Metadata Files
Readme
Changelog
README.md
HDF5Array 
HDF5Array is an R/Bioconductor package that represents HDF5 datasets as array-like objects in R.
See https://bioconductor.org/packages/HDF5Array for more information, including for how to install the release version of the package (please refrain from installing directly from GitHub).
|BioC version|Status|
|------------|------|
| release | 
|
| devel | 
|
Owner
- Name: Bioconductor
- Login: Bioconductor
- Kind: organization
- Website: https://bioconductor.org
- Repositories: 156
- Profile: https://github.com/Bioconductor
Software for the analysis and comprehension of high-throughput genomic data
GitHub Events
Total
- Issues event: 6
- Issue comment event: 12
- Member event: 1
- Push event: 63
- Fork event: 1
- Create event: 3
Last Year
- Issues event: 6
- Issue comment event: 12
- Member event: 1
- Push event: 63
- Fork event: 1
- Create event: 3
Issues and Pull Requests
Last synced: over 1 year ago
All Time
- Total issues: 53
- Total pull requests: 9
- Average time to close issues: 4 months
- Average time to close pull requests: 3 months
- Total issue authors: 27
- Total pull request authors: 5
- Average comments per issue: 4.38
- Average comments per pull request: 1.89
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 2
- Pull requests: 0
- Average time to close issues: 7 months
- Average time to close pull requests: N/A
- Issue authors: 2
- Pull request authors: 0
- Average comments per issue: 1.5
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- LTLA (17)
- PeteHaitch (6)
- phaverty (3)
- LiNk-NY (2)
- ekernf01 (2)
- vjcitn (2)
- pati-ni (2)
- joe-jhou2 (1)
- kvshams (1)
- BBBBunnyZ (1)
- avalcarcel9 (1)
- mojaveazure (1)
- kokitsuyuzaki (1)
- soulj (1)
- hpages (1)
Pull Request Authors
- PeteHaitch (3)
- yduanBioinfo (3)
- muschellij2 (1)
- LTLA (1)
- LiNk-NY (1)
Top Labels
Issue Labels
enhancement (1)
Pull Request Labels
Dependencies
DESCRIPTION
cran
- DelayedArray >= 0.15.16 depends
- R >= 3.4 depends
- methods * depends
- rhdf5 >= 2.31.6 depends
- BiocGenerics >= 0.31.5 imports
- IRanges * imports
- Matrix * imports
- S4Vectors * imports
- rhdf5filters * imports
- stats * imports
- tools * imports
- utils * imports
- BiocParallel * suggests
- ExperimentHub * suggests
- GenomicFeatures * suggests
- GenomicRanges * suggests
- RUnit * suggests
- SingleCellExperiment * suggests
- SummarizedExperiment >= 1.15.1 suggests
- TENxBrainData * suggests
- h5vcData * suggests
- zellkonverter * suggests