https://github.com/bioconductor/rbgl
An interface to the BOOST graph library
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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✓Committers with academic emails
4 of 28 committers (14.3%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (7.0%) to scientific vocabulary
Keywords
bioconductor-package
core-package
Keywords from Contributors
genomics
bioinformatics
bioconductor
hdf5
rhdf5
gene
mass-spectrometry
u24ca289073
looking-for-maintainer
transcriptome
Last synced: 6 months ago
·
JSON representation
Repository
An interface to the BOOST graph library
Basic Info
- Host: GitHub
- Owner: Bioconductor
- License: other
- Language: C++
- Default Branch: devel
- Homepage: https://bioconductor.org/packages/RBGL
- Size: 27.5 MB
Statistics
- Stars: 2
- Watchers: 8
- Forks: 7
- Open Issues: 0
- Releases: 0
Topics
bioconductor-package
core-package
Created over 8 years ago
· Last pushed 10 months ago
Metadata Files
Readme
Changelog
README.windows
July 9 2003 -- There are bad lines generated in the RBGL.def
file which cause Rcmd INSTALL to die in ld while building
RBGL.dll. I find the following to succeed with either mingw
or cygwin tools:
1) attempt a standard installation and wait for the error
2) edit RBGL/src/RBGL.def and remove all lines containing periods
3) in RBGL/src, MANUALLY perform the creation of the dll with a command like
g++ --shared -s -o RBGL.dll RBGL.def RBGL.a RBGL_res.o -LC:{$R_HOME}/src/gnuwin32 -lg2c -lR
[in the above you will probably need to expand {$R_HOME} manually]
4) attempt the standard installation of the modified source
package. The .dll will not be remade. The boost header set will be
removed and untarred needlessly but this has no significance.
INSTALL will not try to recreate the dll, so the ld error will not recur.
This package does not fully conform to the instructions in rw-FAQ
for including C++ in packages for R for windows. It does not
seem feasible to extern "C" all function names in the entire
boost header distribution. Thus the offending .def file includes
many symbols of no use to R. Advice on how to rectify this or
on how to automate the process of repairing the .def file should
be posted to stvjc@channing.harvard.edu
Owner
- Name: Bioconductor
- Login: Bioconductor
- Kind: organization
- Website: https://bioconductor.org
- Repositories: 156
- Profile: https://github.com/Bioconductor
Software for the analysis and comprehension of high-throughput genomic data
GitHub Events
Total
- Push event: 2
- Fork event: 1
- Create event: 2
Last Year
- Push event: 2
- Fork event: 1
- Create event: 2
Committers
Last synced: 7 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Vince Carey | s****c@c****u | 158 |
| Li Long | l****g@i****h | 140 |
| Dan Tenenbaum | d****a@f****g | 26 |
| Robert Gentleman | r****m@f****g | 25 |
| Patrick Aboyoun | u****n | 24 |
| Nitesh Turaga | n****a@g****m | 14 |
| Herve Pages | h****s@f****g | 14 |
| Seth Falcon | s****n@f****g | 14 |
| Samuela Pollack | s****k@j****u | 13 |
| J Wokaty | j****y | 13 |
| Jeff Gentry | j****y@j****u | 9 |
| Martin Morgan | m****n@f****g | 8 |
| Ubuntu | u****u@i****l | 4 |
| Ubuntu | u****u@i****l | 4 |
| Martin Morgan | m****n@r****g | 3 |
| Nishant Gopalakrishnan | n****k@f****g | 3 |
| Hervé Pagès | h****s@f****g | 2 |
| vobencha | v****a@g****m | 2 |
| A Wokaty | a****y@s****u | 2 |
| Chao-Jen Wong | c****2@f****g | 2 |
| vobencha | v****n@r****g | 2 |
| Florian Hahne | f****e@d****e | 1 |
| Wolfgang Huber | w****r@d****e | 1 |
| Emmanuel Taiwo | 1****7 | 1 |
| Henrik Bengtsson | hb@a****g | 1 |
| Nathaniel Hayden | n****n@f****g | 1 |
| Paul Shannon | p****n@f****g | 1 |
| Sonali Arora | s****a@f****g | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 7 months ago
All Time
- Total issues: 2
- Total pull requests: 2
- Average time to close issues: about 2 hours
- Average time to close pull requests: 12 days
- Total issue authors: 2
- Total pull request authors: 2
- Average comments per issue: 3.5
- Average comments per pull request: 9.5
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- mjsteinbaugh (1)
- jwokaty (1)
Pull Request Authors
- HenrikBengtsson (1)
- devbird007 (1)
Top Labels
Issue Labels
bug (1)
Pull Request Labels
Dependencies
DESCRIPTION
cran
- graph * depends
- methods * depends
- methods * imports
- BiocGenerics * suggests
- BiocStyle * suggests
- RUnit * suggests
- Rgraphviz * suggests
- XML * suggests
- knitr * suggests