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Open Source Science

https://github.com/bioconductor/seqinfo

A simple S4 class for storing basic information about a collection of genomic sequences

https://github.com/bioconductor/seqinfo

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (5.2%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

A simple S4 class for storing basic information about a collection of genomic sequences

Basic Info
  • Host: GitHub
  • Owner: Bioconductor
  • Language: R
  • Default Branch: devel
  • Homepage:
  • Size: 51.8 KB
Statistics
  • Stars: 1
  • Watchers: 7
  • Forks: 0
  • Open Issues: 1
  • Releases: 0
Created about 1 year ago · Last pushed 11 months ago
Metadata Files
Readme Changelog

README.md

Seqinfo is an R/Bioconductor package that implements a simple S4 class for storing basic information about a collection of genomic sequences.

See https://bioconductor.org/packages/Seqinfo for more information including how to install the release version of the package (please refrain from installing directly from GitHub).

Owner

  • Name: Bioconductor
  • Login: Bioconductor
  • Kind: organization

Software for the analysis and comprehension of high-throughput genomic data

GitHub Events

Total
  • Issues event: 1
  • Watch event: 1
  • Issue comment event: 1
  • Push event: 5
  • Create event: 1
Last Year
  • Issues event: 1
  • Watch event: 1
  • Issue comment event: 1
  • Push event: 5
  • Create event: 1

Dependencies

DESCRIPTION cran
  • BiocGenerics * depends
  • methods * depends
  • IRanges * imports
  • S4Vectors * imports
  • stats * imports
  • BSgenome * suggests
  • BSgenome.Celegans.UCSC.ce2 * suggests
  • BSgenome.Hsapiens.UCSC.hg38 * suggests
  • BiocStyle * suggests
  • GenomeInfoDb * suggests
  • GenomicFeatures * suggests
  • GenomicRanges * suggests
  • RUnit * suggests
  • TxDb.Dmelanogaster.UCSC.dm3.ensGene * suggests
  • TxDb.Hsapiens.UCSC.hg38.knownGene * suggests
  • knitr * suggests
  • rmarkdown * suggests