Data

Tools

Indexes

Applications

Experiments

Open Source Science

https://github.com/bioconductor/annotationhubdata

Transform public data resources into Bioconductor Data Structures

https://github.com/bioconductor/annotationhubdata

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic links in README
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (0.9%) to scientific vocabulary

Keywords

core-package
Last synced: 6 months ago · JSON representation

Repository

Transform public data resources into Bioconductor Data Structures

Basic Info
  • Host: GitHub
  • Owner: Bioconductor
  • Language: R
  • Default Branch: devel
  • Size: 23.7 MB
Statistics
  • Stars: 0
  • Watchers: 8
  • Forks: 6
  • Open Issues: 5
  • Releases: 0
Topics
core-package
Created over 8 years ago · Last pushed 10 months ago
Metadata Files
Changelog

Owner

  • Name: Bioconductor
  • Login: Bioconductor
  • Kind: organization

Software for the analysis and comprehension of high-throughput genomic data

GitHub Events

Total
  • Push event: 3
  • Fork event: 1
  • Create event: 2
Last Year
  • Push event: 3
  • Fork event: 1
  • Create event: 2

Issues and Pull Requests

Last synced: over 1 year ago

All Time
  • Total issues: 3
  • Total pull requests: 5
  • Average time to close issues: 2 days
  • Average time to close pull requests: about 22 hours
  • Total issue authors: 2
  • Total pull request authors: 5
  • Average comments per issue: 1.0
  • Average comments per pull request: 3.4
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 1.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • lshep (2)
  • lcolladotor (1)
Pull Request Authors
  • lcolladotor (1)
  • lshep (1)
  • LiNk-NY (1)
  • Kayla-Morrell (1)
  • lgatto (1)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

DESCRIPTION cran
  • AnnotationHub >= 2.15.15 depends
  • GenomicRanges * depends
  • IRanges >= 2.3.23 depends
  • R >= 3.2.2 depends
  • S4Vectors >= 0.7.21 depends
  • methods * depends
  • utils * depends
  • AnnotationDbi * imports
  • AnnotationForge * imports
  • Biobase * imports
  • BiocCheck * imports
  • BiocGenerics * imports
  • BiocManager * imports
  • Biostrings * imports
  • DBI * imports
  • GenomeInfoDb >= 1.15.4 imports
  • GenomicFeatures * imports
  • OrganismDbi * imports
  • RCurl * imports
  • RSQLite * imports
  • Rsamtools * imports
  • XML * imports
  • biocViews * imports
  • futile.logger >= 1.3.0 imports
  • graph * imports
  • jsonlite * imports
  • rtracklayer * imports
  • BiocStyle * suggests
  • GenomeInfoDbData * suggests
  • HubPub * suggests
  • RUnit * suggests
  • grasp2db * suggests
  • knitr * suggests
  • rmarkdown * suggests