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Open Source Science

https://github.com/bioconductor/bioconductor.org_archive

https://github.com/bioconductor/bioconductor.org_archive

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (5.3%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: Bioconductor
  • Language: HTML
  • Default Branch: devel
  • Size: 21.1 MB
Statistics
  • Stars: 2
  • Watchers: 17
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created about 11 years ago · Last pushed over 3 years ago
Metadata Files
Readme

README.cloudfront.md

CloudFront

CloudFront is a content delivery network (CDN). The idea is that if a user in say, Singapore hits our web site, the files she requested will be cached in a location near her and her next access (or that of any other user in that area) will be faster.

Our CloudFront distribution can be managed through the AWS Console.

Once CloudFront is running, there isn't much you have to do.

Just be aware that when you are outside the Hutch network and you hit bioconductor.org, you are hitting CloudFront.

A good way to test this is as follows:

$ curl -I http://bioconductor.org/ HTTP/1.1 200 OK Content-Type: text/html Content-Length: 16531 Connection: keep-alive Date: Tue, 19 May 2015 17:38:25 GMT Server: Apache/2.2.12 (Linux/SUSE) Last-Modified: Tue, 19 May 2015 17:30:47 GMT ETag: "62f141-4093-51672abbe1fc0" Accept-Ranges: bytes Cache-Control: max-age=600 Expires: Tue, 19 May 2015 17:48:25 GMT Vary: Accept-Encoding X-Cache: Miss from cloudfront Via: 1.1 70d79aa19e315b47281005f9e3c25c88.cloudfront.net (CloudFront) X-Amz-Cf-Id: 97PFtz_9dGUDk2kHEjggRwbhRkcSG0vNg9akW2y70mvyK0iKO882MA==

The X-cache and X-Amz... headers tell you you are dealing with CloudFront. If you want to hit the web server at FHCRC, go instead to http://master.bioconductor.org.

Different file types have different cache expiration times, this is set in the .htaccess file for the web site.

If a file gets propagated by CloudFront that shouldn't be, you can remove it by invalidating it, go to the console page for our distribution and click on the "Invalidations" tab.

Owner

  • Name: Bioconductor
  • Login: Bioconductor
  • Kind: organization

Software for the analysis and comprehension of high-throughput genomic data

GitHub Events

Total
  • Member event: 1
Last Year
  • Member event: 1

Issues and Pull Requests

Last synced: over 1 year ago

All Time
  • Total issues: 16
  • Total pull requests: 10
  • Average time to close issues: about 1 year
  • Average time to close pull requests: 3 months
  • Total issue authors: 4
  • Total pull request authors: 4
  • Average comments per issue: 3.94
  • Average comments per pull request: 1.2
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • b-long (10)
  • dtenenba (3)
  • jimhester (2)
  • aoles (1)
Pull Request Authors
  • b-long (5)
  • jimhester (3)
  • vobencha (1)
  • schifferl (1)
Top Labels
Issue Labels
bug (7)
Pull Request Labels
enhancement (1)

Dependencies

Gemfile rubygems
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  • aws-sdk >= 0
  • descriptive_statistics >= 0
  • haml >= 0
  • hpricot >= 0
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  • nanoc >= 0
  • nanoc3 >= 0
  • nokogiri >= 0
  • pg >= 0
  • pry >= 0
  • pry-byebug >= 0
  • rack >= 0
  • rack-cache >= 0
  • rake >= 0
  • rdiscount >= 0
  • redis >= 0
  • rgl >= 0
  • sass >= 0
  • sequel >= 0
  • sqlite3 >= 0
  • treetop-dcf >= 0
  • twitter >= 0
  • uuid >= 0
Gemfile.lock rubygems
  • addressable 2.3.6
  • adsf 1.2.0
  • algorithms 0.5.0
  • aws-sdk 1.60.2
  • aws-sdk-v1 1.60.2
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  • byebug 4.0.5
  • coderay 1.1.0
  • colored 1.2
  • columnize 0.9.0
  • cri 2.6.1
  • descriptive_statistics 2.5.1
  • domain_name 0.5.23
  • equalizer 0.0.9
  • faraday 0.9.0
  • haml 4.0.6
  • hpricot 0.8.6
  • htmlentities 4.3.3
  • http 0.6.3
  • http-cookie 1.0.2
  • http_parser.rb 0.6.0
  • httparty 0.13.3
  • json 1.8.3
  • kramdown 1.6.0
  • macaddr 1.7.1
  • mechanize 2.7.3
  • memoizable 0.4.2
  • method_source 0.8.2
  • mime-types 2.4.3
  • mini_portile 0.6.2
  • multi_xml 0.5.5
  • multipart-post 2.0.0
  • nanoc 3.7.4
  • nanoc3 3.3.0
  • naught 1.0.0
  • net-http-digest_auth 1.4
  • net-http-persistent 2.9.4
  • nokogiri 1.6.5
  • ntlm-http 0.1.1
  • pg 0.18.1
  • polyglot 0.3.5
  • pry 0.10.1
  • pry-byebug 3.1.0
  • rack 1.6.0
  • rack-cache 1.2
  • rake 10.4.2
  • rdiscount 2.1.7.1
  • redis 3.2.0
  • rgl 0.5.0
  • sass 3.4.9
  • sequel 4.22.0
  • simple_oauth 0.3.1
  • slop 3.6.0
  • sqlite3 1.3.10
  • stream 0.5
  • systemu 2.6.4
  • thread_safe 0.3.4
  • tilt 2.0.1
  • treetop 1.5.3
  • treetop-dcf 0.2.1
  • twitter 5.13.0
  • unf 0.1.4
  • unf_ext 0.0.6
  • uuid 2.3.7
  • webrobots 0.1.1