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Open Source Science

https://github.com/bioconductor/bioc2020

BioC2020: Where Software and Biology Connect

https://github.com/bioconductor/bioc2020

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (7.9%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

BioC2020: Where Software and Biology Connect

Basic Info
Statistics
  • Stars: 12
  • Watchers: 16
  • Forks: 11
  • Open Issues: 7
  • Releases: 0
Created over 6 years ago · Last pushed over 3 years ago
Metadata Files
Readme Code of conduct

README.md

This repository contains material for the Bioconductor annual conference. View the conference web site.

Edit or add material as markdown files in the docs/ directory. Please wrap lines to 80 character width and aim for simple markdown rather than elaborate html or other content.

Please follow best practices by previewing changes locally.

  1. Make sure that ruby and bundler are installed, following the 'Requirements' section of GitHub's documentation.

  2. Clone the repository and switch to the docs/ directory

    cd BioC2020/docs

  3. Install or update bundler to install the ruby pre-requisities.

    gem install --user-install bundler # this will require to export the PATH to run the other commands
gem install  bundler # needs sudo

  4. Install ruby pre-requisites.

    bundle config set path 'vendor/bundle'  # once only, use instead of the --path flag
bundle install --path vendor/bundle     # once only; references Gemfile
# If the installer complains, add the suggested $PATH_TO_RUBY/bin
# $HOME/.gem/ruby/2.3.0/bin/bundle
# directory to your ~/.bash_profile or ~/.bashrc or similar.

  5. Execute the jekyll server

    bundle exec jekyll serve

    and view the results at https://localhost:4000

Owner

  • Name: Bioconductor
  • Login: Bioconductor
  • Kind: organization

Software for the analysis and comprehension of high-throughput genomic data

GitHub Events

Total
  • Issues event: 1
Last Year
  • Issues event: 1

Issues and Pull Requests

Last synced: over 1 year ago

All Time
  • Total issues: 38
  • Total pull requests: 63
  • Average time to close issues: 3 months
  • Average time to close pull requests: 4 days
  • Total issue authors: 11
  • Total pull request authors: 13
  • Average comments per issue: 2.55
  • Average comments per pull request: 0.79
  • Merged pull requests: 55
  • Bot issues: 0
  • Bot pull requests: 5
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • lwaldron (9)
  • mdozmorov (9)
  • seandavi (7)
  • lpantano (5)
  • lcolladotor (2)
  • csoneson (1)
  • aedin (1)
  • LiNk-NY (1)
  • hpages (1)
  • mccallm (1)
  • gullahoo (1)
Pull Request Authors
  • mdozmorov (20)
  • lpantano (13)
  • dependabot[bot] (5)
  • HelenaLC (5)
  • csoneson (5)
  • mtmorgan (4)
  • lwaldron (3)
  • LiNk-NY (2)
  • aedin (2)
  • fboehm (1)
  • SiminaB (1)
  • gdequeiroz (1)
  • PeteHaitch (1)
Top Labels
Issue Labels
help wanted (4) bug (1) question (1)
Pull Request Labels
dependencies (5)

Dependencies

docs/Gemfile rubygems
  • github-pages >= 0 development
  • jekyll >= 0
  • minimal >= 0
docs/Gemfile.lock rubygems
  • 111 dependencies